FMO01515.5prime Sequence
737 bp (737 high quality bases) assembled on 2008-03-21
> FMO01515.5prime
AAAAAACCAAGTTATCAGTCGACATGGGCATAAATATTTTTATAAACAGT
AAATATATAATTTCTTGTGGAGATCACGTTAAATGTGATGAGCTTTACAG
TCGGATTGCGGAGAAAACAAACCTGCAACCAGGGGAATACTACTTAGTCA
GCAATGGCAAGCGCTTGGAGGGAGAAATTTCATCTGGAGATGTTCACTGC
GTTCTCCGCCAGCTCGGTGGCAAAGGAGGATTTGGTTCCATGCTTCGAGC
CATTGGTGCGCAAATTGAAAAGACAACCAATCGCGAGGCTTGCCGCGATC
TAAGTGGTCGCCGTTTGCGGGATATCAACGAGGAGAAGCGGGTGCGCGCC
TGGCTGGAGAAGCAGGGCGAACGGGAACGGGAGGCCGAGGAGCGTAAAAA
GCGAAAAATCGAGAAACTGCTGGCCGTGCCCAAGCACGACTTTAAGGACG
ATAAGTACGAGGAAGCCAGGGCTAATCTGACCGAGAAGGTAAACGACGCC
TTCGAGGAGGGACTCAAGCAGGCCGAGGAGAACAAGGAGAAAGGCGTCGA
GGAAGCAACTTCCAGTGGCACAAAGAGGAAATCCCCCGCCGTAGACAAGA
CCAAGGCAAAAAAGAAGAAAAAGGGCACACTCTGGATAGACGATGACATC
TCTGGATCCGACTCTGACTCTGACGACAGCGAGGAGGAGCCAAAAACACA
GAAAAAAGCTATACAAAACGCAAGCTTTCTAGACCAT
FMO01515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5986-RB | 813 | CG5986-RB | 29..730 | 18..719 | 3495 | 99.9 | Plus |
| CG5986-RA | 1321 | CG5986-RA | 537..1238 | 18..719 | 3495 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24048486..24049085 | 120..719 | 3000 | 100 | Plus |
| 3R | 32079331 | 3R | 24048326..24048427 | 18..119 | 495 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:16 has no hits.
FMO01515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:24 Download gff for
FMO01515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5986-RA | 531..1238 | 9..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:41 Download gff for
FMO01515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5986-RA | 531..1238 | 9..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:30 Download gff for
FMO01515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5986-RA | 531..1238 | 9..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:30 Download gff for
FMO01515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24048320..24048427 | 9..119 | 95 | -> | Plus |
| 3R | 24048486..24049085 | 120..719 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:41 Download gff for
FMO01515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19874042..19874149 | 9..119 | 95 | -> | Plus |
| arm_3R | 19874208..19874807 | 120..719 | 100 | | Plus |
