Clone FMO01521 Report

Search the DGRC for FMO01521

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:15
Well:21
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7214-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01521.5prime Sequence

466 bp (466 high quality bases) assembled on 2008-03-21

> FMO01521.5prime
AAAAACAAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGT
TCGTGTGCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCC
GGTGTGTCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGG
AGCCTGGAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTG
CTCCCTGGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCC
TGGGGTCTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAA
CCTGGCCCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCT
ATGTGGCCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACAC
ATCAACTCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGGC
AAGCTTTCTAGACCAT

FMO01521.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7214-RA 1041 CG7214-RA 85..512 21..448 2140 100 Plus
Acp1-RA 858 CG7216-RA 369..416 356..403 180 91.7 Plus
CG31904-RB 3572 CG31904-RB 3087..3134 356..403 180 91.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7744211..7744632 448..27 2110 100 Minus
2L 23513712 2L 7734853..7734900 403..356 180 91.7 Minus
2L 23513712 2L 7741004..7741051 403..356 180 91.7 Minus
Blast to na_te.dros performed on 2014-11-28 19:54:57 has no hits.

FMO01521.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:29 Download gff for FMO01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 81..518 15..453 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:37 Download gff for FMO01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 79..516 15..453 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:42 Download gff for FMO01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 79..516 15..453 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:42 Download gff for FMO01521.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7744207..7744632 27..453 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:37 Download gff for FMO01521.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7744207..7744632 27..453 99   Minus