FMO01521.5prime Sequence
466 bp (466 high quality bases) assembled on 2008-03-21
> FMO01521.5prime
AAAAACAAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGT
TCGTGTGCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCC
GGTGTGTCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGG
AGCCTGGAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTG
CTCCCTGGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCC
TGGGGTCTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAA
CCTGGCCCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCT
ATGTGGCCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACAC
ATCAACTCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGGC
AAGCTTTCTAGACCAT
FMO01521.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..512 | 21..448 | 2140 | 100 | Plus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 356..403 | 180 | 91.7 | Plus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 356..403 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744211..7744632 | 448..27 | 2110 | 100 | Minus |
2L | 23513712 | 2L | 7734853..7734900 | 403..356 | 180 | 91.7 | Minus |
2L | 23513712 | 2L | 7741004..7741051 | 403..356 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:57 has no hits.
FMO01521.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:29 Download gff for
FMO01521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 81..518 | 15..453 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:37 Download gff for
FMO01521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 15..453 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:42 Download gff for
FMO01521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 15..453 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:42 Download gff for
FMO01521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744207..7744632 | 27..453 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:37 Download gff for
FMO01521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744207..7744632 | 27..453 | 99 | | Minus |