FMO01524.5prime Sequence
692 bp (692 high quality bases) assembled on 2008-03-21
> FMO01524.5prime
AAAAAACAAAGTTATCAGTCGACATGTCGCTAACTATGCGAATTTTCACC
GCATCGCGCAACGGACAGCGCCTGTTTGGCAGCCATGGAGCCCGGCTGCT
GGCCGCCCAGCGAGCAGAACCCAAAGATATCGTCGAGGTTCCCAAGGGCT
ATGTGTATGTAAACAACAAGGAACTGAGCATGGAGTTTGCCGACATCACG
GACCGTGCTGCATCCACCATGTTCTTCGGTGAACTCTTACGTGGATTTGC
CGTCACCCTGGCGCACATCTTCAAGGAACCGGCCACTATCAACTATCCCT
TTGAAAAGGGACCACTGAGCCCGCGATTCCGCGGAGAACATGCCCTTCGT
CGTTATCCCAGTGGAGAGGAGCGCTGCATCGCTTGCAAGCTATGCGAGGC
TATTTGCCCCGCACAGGCGATCACCATCGAAGCGGAGGAGCGCGCGGATG
GCAGCAGACGTACCACACGCTACGATATCGACATGACCAAGTGCATCTAC
TGCGGATTCTGTCAGGAAGCCTGTCCCGTGGACGCCATCGTCGAGGGACC
CAACTTCGAGTTCTCCACGGAGACGCACGAGGAGCTGCTGTACAACAAGG
AGAAGCTTCTCTGCAACGGCGACAAGTGGGAGTCCGAGATTGCCTCTAAC
TTGCAGGCCGACCATCTCTATCGTGCAAGCTTTCTAGACCAT
FMO01524.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ND23-RA | 819 | CG3944-RA | 89..739 | 24..674 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15836354..15836807 | 516..63 | 2270 | 100 | Minus |
| 3R | 32079331 | 3R | 15836128..15836288 | 674..514 | 805 | 100 | Minus |
| 3R | 32079331 | 3R | 15836989..15837029 | 64..24 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:48:38 has no hits.
FMO01524.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:20 Download gff for
FMO01524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3944-RA | 69..729 | 24..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:28 Download gff for
FMO01524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ND23-RA | 89..749 | 24..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:55 Download gff for
FMO01524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ND23-RA | 89..749 | 24..685 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:55 Download gff for
FMO01524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15836118..15836286 | 516..685 | 97 | <- | Minus |
| 3R | 15836355..15836806 | 64..515 | 100 | <- | Minus |
| 3R | 15836990..15837029 | 24..63 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:28 Download gff for
FMO01524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11661840..11662008 | 516..685 | 97 | <- | Minus |
| arm_3R | 11662077..11662528 | 64..515 | 100 | <- | Minus |
| arm_3R | 11662712..11662751 | 24..63 | 100 | | Minus |
