FMO01525.5prime Sequence
683 bp (683 high quality bases) assembled on 2008-03-21
> FMO01525.5prime
CAGTCGACATGGACTTCGGAGACGATTTCGCTGCCAAGGAGGACGTGGAT
CCGGCGGCCGAGTTCCTGGCGCGCGAACAGTCAGCTCTCGGGGACTTGGA
GGCGGAGATTACGGGTGGATCTGCATCAGCTCCTCCGGCTGCATCCACAG
ACGAGGGCTTGGGTGAGCTTCTGGGAGGCACCGCCTCCGAAGGCGATTTG
CTCTCTGCTGGCGGCACGGGTGGCCTCGAATCCTCCACTGGCAGTTTTGA
GGTCATTGGTGGCGAGTCCAATGAACCCGTGGGCATATCCGGTCCGCCGC
CGTCGCGGGAAGAGCCCGAAAAGATACGCAAATGGCGCGAAGAGCAAAAG
CAACGACTGGAGGAGAAGGACATCGAGGAGGAGCGAAAAAAGGAGGAACT
CCGACAGCAGTCCAAGAAGGAGCTGGACGACTGGTTGCGCCAGATTGGCG
AGTCCATATCGAAGACCAAACTGGCGTCGCGGAATGCCGAGAAACAAGCC
GCCACCCTGGAGAATGGCACCATCGAGCCGGGCACCGAATGGGAGCGCAT
AGCCAAGCTCTGCGACTTCAATCCCAAGGTGAACAAGGCGGGAAAGGACG
TCTCCCGCATGCGATCCATCTACCTGCACCTCAAGCAGAATCCCATCCAG
GTGCAGAAGAGCACCGCAAGCTTTCTAGACCAT
FMO01525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clc-RD | 1073 | CG6948-RD | 135..792 | 8..665 | 3275 | 99.8 | Plus |
| Clc-RC | 1230 | CG6948-RC | 292..949 | 8..665 | 3275 | 99.8 | Plus |
| Clc-RB | 1005 | CG6948-RB | 67..724 | 8..665 | 3275 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20242797..20243454 | 8..665 | 3275 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:48:15 has no hits.
FMO01525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:33 Download gff for
FMO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6948-RA | 185..848 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:45 Download gff for
FMO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:24 Download gff for
FMO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:24 Download gff for
FMO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20242791..20243454 | 1..665 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:45 Download gff for
FMO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20235891..20236554 | 1..665 | 99 | | Plus |
