FMO01527.5prime Sequence
651 bp (651 high quality bases) assembled on 2008-03-21
> FMO01527.5prime
TATAAAACGAAGTTATCAGTCGACATGAGTTCTCTAAAGCTCCAGAAGAG
GCTCGCAGCCTCCGTGCTGCGATGCGGCAAGAAGAAGGTCTGGTTGGATC
CCAATGAAATCAACGAGATCGCTAACACAAACTCGCGTCAGAACATTCGC
AAGCTTATCAAGGATGGTCTGATCATCAAGAAGCCCGTCGTGGTCCACTC
CCGTTACCGTGTGCGCAAAAACACCGAGGCCCGCCGCAAGGGACGTCACT
GCGGATTCGGAAAGCGTAAGGGTACTGCGAACGCCCGCATGCCTACCAAG
CTGCTGTGGATGCAGCGCCAGCGCGTTCTGCGCCGCCTGTTGAAGAAGTA
CCGCGACAGCAAGAAGATTGACAGGCACCTGTACCACGACCTGTACATGA
AGTGCAAGGGTAACGTATTCAAGAACAAGCGCGTCCTCATGGAGTACATC
CACAAGAAGAAGGCTGAGAAGCAGCGCAGCAAGATGCTGGCTGATCAGGC
CGAGGCTCGCCGACAGAAGGTGCGTGAGGCCCGCAAGCGCCGCGAGGAGC
GTATTGCCACCAAGAAGCAGGAGCTCATCGCCCTGCATGCTAAGGAGGAC
GAGATCGCTGCCAAGGCCGCCACCGCGGGTCACGCAAGCTTTCTAGACCA
T
FMO01527.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL19-RB | 755 | CG2746-RB | 36..645 | 24..633 | 3050 | 100 | Plus |
| RpL19-RA | 1361 | CG2746-RA | 74..683 | 24..633 | 3050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24968555..24969051 | 633..137 | 2485 | 100 | Minus |
| 2R | 25286936 | 2R | 24969116..24969226 | 138..28 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:11 has no hits.
FMO01527.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:35 Download gff for
FMO01527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2746-RB | 25..650 | 16..643 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:55 Download gff for
FMO01527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL19-RA | 67..692 | 16..643 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:42 Download gff for
FMO01527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL19-RA | 67..692 | 16..643 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:42 Download gff for
FMO01527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24968546..24969051 | 137..643 | 99 | <- | Minus |
| 2R | 24969118..24969224 | 30..136 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:55 Download gff for
FMO01527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20856069..20856574 | 137..643 | 99 | <- | Minus |
| arm_2R | 20856641..20856747 | 30..136 | 100 | <- | Minus |
