FMO01537.5prime Sequence
590 bp (590 high quality bases) assembled on 2008-03-21
> FMO01537.5prime
CAGTCGACATGCTACCACGTTTGCTACTGCCCATCATTGGAGGAGTATTA
ATACTTTTGATAGTTGATCAATGCAATGGCAAGCGCAAGTGGGACTACGA
ACCGCTGTCCATTGAAACCTATACCACGGATGAGACTAAGCTGAAGATTG
CGGCCAAAGTGGAGCGAGTCGGTAGGGGAGAATATGCCCTTTCTGGCAAC
ATTGAATTTAAGTACACACCAGAAGATAATACCATGGTTGAAGCAATGGC
CTATCGAAGCACCTCCGGGGACGAAAATGACTACAAGATTATGCCGTTTA
GCATCCCGAAACAGCCATATGTTGAGTTCATGAACAGCCACTATAAGAAC
GTAGTGCTACCAAATCTGGGCGATTGTTCCAATCTCATCAAGTTTGATGG
CAAATTCGAGCCACCGTGGCCCCAGGATACGTACGTGTTGGAAAAGTGTG
TGGCAAACAGTGATGGTTTTCCGGATATGGTTCCCGAGGGCTACTACAAG
GTCAATTTCACCTTGACGAATCCCGTGGATTGGGGATTCATTCTGATTGT
GAAGATAACCACAAAACTTGTCGCAAGCTTTCTAGACCAT
FMO01537.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14502-RD | 711 | CG14502-RD | 30..593 | 9..572 | 2820 | 100 | Plus |
| CG14502-RC | 1269 | CG14502-RC | 588..1151 | 9..572 | 2820 | 100 | Plus |
| CG14502-RB | 2224 | CG14502-RB | 1543..2106 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18294258..18294594 | 236..572 | 1685 | 100 | Plus |
| 2R | 25286936 | 2R | 18294010..18294166 | 82..238 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 18293875..18293949 | 9..83 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:56 has no hits.
FMO01537.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:48 Download gff for
FMO01537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:25 Download gff for
FMO01537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:30 Download gff for
FMO01537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:30 Download gff for
FMO01537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18293875..18293949 | 9..83 | 100 | -> | Plus |
| 2R | 18294012..18294164 | 84..236 | 100 | -> | Plus |
| 2R | 18294259..18294594 | 237..572 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:25 Download gff for
FMO01537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14181380..14181454 | 9..83 | 100 | -> | Plus |
| arm_2R | 14181517..14181669 | 84..236 | 100 | -> | Plus |
| arm_2R | 14181764..14182099 | 237..572 | 100 | | Plus |
