FMO01547.5prime Sequence
1232 bp (1033 high quality bases) assembled on 2008-03-21
> FMO01547.5prime
ATAAAACGAAGTTATCAGTCGACATGGATATATCCGCGCCACCAAACAAA
CGTGCTCGAAAATCACCCAATCTGGATGAAGACATAACTGGGATCCGGGC
CATCCTCTCCGATGAGTTCGACGAGGATATTGCGCTCATCAAGGCGCACA
GTTGCGAGTTGGAGACGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTC
TCACAGAAATTGCCCCACTTTCAACACCTAAAGCGCGTCCAGGATCGCAG
CGTGCTCATATGTCCCAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAAC
AACACCTTGAACAGTTTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGC
CAGGGAGTCCGGGTGGTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGT
GCAGTACGAGAAGACCCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATC
ACTACTCGGAGTCACTGAGGAATGGCAGCAACTTTAGCTCCGCACAACGC
ACATTTCACAAAAGGATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGT
CAATGCCAATCGTCCGGTGGGCATCTGCGTGGATCCGCGACAACCCAGCA
TTGTGTCCATTGCTGGAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGC
TGCATGATGCTCGTCGATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCAC
AAAAACGGAGGTTACATTCACCGAAGATTTCAAGAAAGATACCACTCTGC
GGGGTATTCCTAAAGCCTACTACGATTACCTGATGAACAATGAAGACTAC
AAAGACCTGACATTCGGAGCGGAAAAGTCGAGAGAATGCAAAGAAGTGGA
CGCAGTTCAAGGAGCAGATAACCTGGCCCAATTCGGACCCTATCTGTGCA
CCGGCTACGATATCTATCTGCTGCAGAACCCTGCCTTATGTGCTCCATGG
CCCTGGTACATAGCAGGCGAAAAGAGTATTTTCGTTAAGACTCTGAAAAC
GGAGCTCTAGCCACGAGATTCCAACTGCATTCGGTGCGGAACTCAACCAT
CACTACGGAGTGTTCCAGTCACACCAGAGAATGAAGACTTGACGGCAGCT
TCTAAACATTCGTTGGCGGCGCGGGCCCAGTAGTGTCTAATCTAATCATA
TCAAATCCATACCACTAGCTAGGAAGTCCTGATCTGATCATAGTCGTGAT
TTCTCCACCATTAAAACGCCTCGGCGGGGCAA
FMO01547.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..1117 | 24..1094 | 5125 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18614177 | 24..1069 | 4960 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:33:07 has no hits.
FMO01547.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:45 Download gff for
FMO01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 46..1125 | 24..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:44 Download gff for
FMO01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1117 | 24..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:40 Download gff for
FMO01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1117 | 24..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:40 Download gff for
FMO01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18614206 | 24..1094 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:44 Download gff for
FMO01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501711 | 24..1094 | 98 | | Plus |
