FMO01551.5prime Sequence
868 bp (868 high quality bases) assembled on 2008-03-21
> FMO01551.5prime
CAGTCGACATGATGTCGCATCAACTGCAGCAGACACGCCGCCGTTTGGGC
TCCGTTAGCGATTCGGCGCCACCATCGGAGTCCAGTGAGGGCACAGGCTC
CTCCCTGGAGCCACGGGACGAGCTGATTCTCCATCCGGACTGGTCGGCCC
ACTCGCATTCGTCGGCACAGAGGAGCAGCGCCCATGGAACCACATCGCTG
TACAATGCCTCGGATATCGATGCGGATACCATCAGCACGGACACCACGAG
CAACACAAATCTATCGGACTACGAACGTGGTCAGGTGGAGAGTTTCTTCG
GCGGATTGGGCACAGAGATATTCGTGAGCGGCGCTTTGGCCAATCTCTAC
GAGGGAACCGGAAACGATGGCGACTGGCGTTTGGTGTTCACCGGCATACC
GGTGATACTGCACGACAAGGGAAACTCCAAGGCCAGAGCCATACCCAGAG
TGACGCTGGTTCTGGCGGAGAGGGGCTCCTGCTTCGCCCTGTGGTCGGAT
CGGATTGATAACCTGTCGAACTATCGGATCGCGGGTCCCTCGTTCCACAC
GATGTGCCGGTCCAGCAATCATCAGCAGATGATTGGCTTCAGCTTCGATT
CCACGGATGCGGCACGCGAATTGTGGCAGCACGTGGAGCGTTTGGTCAGC
AATCCAGAGAATGAGGCTCTAACCGTGGCCGGAACCCGCAAGCCGAAGAA
ACAGAAGCGCGTCAAGCCGGCTCCCTTGCCACCGAAGTCCCAGATTTCGC
ATCCATGCCAATTCCACCACGTGACCAGTGTGGTCAAGGAGGACAGCGAA
CGGTACTACAGCATGCAGCCTTCGGACCCCCCAATCCCCAGCAGCATCGT
GCAAGCTTTCTAGACCAT
FMO01551.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR3-RC | 2067 | CG15162-RC | 497..1339 | 9..850 | 4190 | 99.9 | Plus |
| MESR3-RB | 2099 | CG15162-RB | 529..1371 | 9..850 | 4190 | 99.9 | Plus |
| MESR3-RA | 2099 | CG15162-RA | 529..1371 | 9..850 | 4190 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18660208..18661048 | 11..850 | 4155 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:05 has no hits.
FMO01551.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:59 Download gff for
FMO01551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15162-RA | 528..1370 | 9..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:27 Download gff for
FMO01551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR3-RA | 529..1371 | 9..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:30 Download gff for
FMO01551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR3-RA | 529..1371 | 9..850 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:30 Download gff for
FMO01551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18660208..18661048 | 11..850 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:27 Download gff for
FMO01551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18660208..18661048 | 11..850 | 99 | | Plus |
