FMO01559.5prime Sequence
1047 bp (1020 high quality bases) assembled on 2008-03-21
> FMO01559.5prime
AAAAAACCAAGTTATCAGTCGACATGAATGTTTGTCGCCTGTGCTTGTCG
AAGGAACCCAATTTCCCCGTTTTCGGTGCAAATGGATCGACTGCTCTGCA
GATAATGGTCTGCACATCGCTGGAGATCGAGCCCGGCGACGGTCTGCCAC
AGCACATATGCACCATGTGTCGGCTGCAACTGGAGGAGATGCACTGCTTC
CGACGACGCTGCCTCGCAGCCGATCGCAAATTGAGGCGCCACAAGGCGTT
GCAGCGGCAGGGTGTCAAGTCGCAGCTGAGTGAAGTGGAGGAGGAGCGGG
GCTCCGGGGAAGGATGCACGCAAACTGGCTGCGCCGAGAACAATGCCCAG
TGGCGCCAGCAGGCCGCCCAGCTCATTAGCAGCGAGATCGACGCGTATAA
AAAGGAGCTGCTCAGCACTTGCAAGCAAGCTGTGCGGGCGGAAATCGAGC
TGGAGCTGCGGGCGGAACTCGAAGAGGTCATCATACCCGAAGCCAAGCAG
CAGTTGCGACTGAGCGTTCTTGACGACGTGTTTGTCGAACTGGAACGGTA
CTTTGTGCGCAAGCGCAATGAGGCGACCTATGAGATGAAGATGAACTTAA
GCAGTCCGCTGCCTGACGAACAGACCGCTGGCTTCTACGAAACAGACATG
GGCCAGGAGCTAAGGGAGCAGAGCGATAACAGCGTGGTGGAGTTACTGGA
CGATGAACCAGAAGCCAGCAGACAGCCAGCTGCAACGCCACTAGTTGCTG
TGCCCATGGTTGAGATCAACATGAACGACCCGCAGCTGAGTCATCTGCGC
AACGACTATAGCAGGGACACCTTTCTGGGTGCCAACACAACTGCCTTAGA
GGATGTAAAAACCCCATCGCCGTGTCGAAAGAAAGTGCGCTTTTATGAGC
CCCAAGCAGACGACCGATAACCTGTGCCGAAAGCACAGTTCCTTCAGACA
AATGCAGCAGTTCGTACGTCGATTTCAAAAGTGTGTGCGCTGTCGTCTAG
GAGGGCGGATAAGCTAATAACACCGTGACGCAAGCTTTCTAAACCAA
FMO01559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31457-RB | 1342 | CG31457-RB | 200..1212 | 22..1030 | 4860 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23127105..23127782 | 699..22 | 3375 | 99.9 | Minus |
| 3R | 32079331 | 3R | 23126711..23127046 | 1030..699 | 1340 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:42:06 has no hits.
FMO01559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:55 Download gff for
FMO01559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31457-RB | 200..1219 | 19..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:13 Download gff for
FMO01559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31457-RB | 197..1216 | 19..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:27 Download gff for
FMO01559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31457-RB | 197..1216 | 19..1035 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:27 Download gff for
FMO01559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23126707..23127045 | 700..1035 | 96 | <- | Minus |
| 3R | 23127105..23127785 | 19..699 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:13 Download gff for
FMO01559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18952429..18952767 | 700..1035 | 96 | <- | Minus |
| arm_3R | 18952827..18953507 | 19..699 | 99 | | Minus |
