FMO01561.5prime Sequence
591 bp (591 high quality bases) assembled on 2008-03-21
> FMO01561.5prime
TATAAAACGAAGTTATCAGTCGACATGTCCTCGCCCAGTGCCGGAAAGCG
ACGCATGGACAACGATGTGATCAAGCTGATCGAATCAAAGCACGAGGTGA
CCATCCTGGGAGGCCTCAACGAGTTCCACGTCAAGTTCTTCGGTCCAACG
GAGACGCCCTACGAGGGCGGCGTGTGGAAGGTGCGCGTCTACCTGCCCGA
CAACTATCCCTTCAAGTCACCGAGCATTGGTTTTGTGAACAAGATCTACC
ATCCGAACATTGACGAATCCTCGGGTACGGTGTGCCTGGATGTTATCAAT
CAGGCCTGGACGGCGTTGTACGATCTATCGAACATATTTGAATCGTTCTT
GCCGCAGCTGCTCACATATCCCAATCCGGTCGATCCGCTCAATCGGGATG
CGGCCGCATTGTACCTGCACGAGCCGGAGGAGTATCATCGCAAGGTGGCC
GACTATGTGCAGCGCTATGCCACCGAGGACGCGTTGCGGGCGGCGCAGCA
GGAGCGGGAGAGCAGCGACAGCGAGTCGAGCATGTCCGACTACAGTGAGG
ATGAGGCCAGGGACATGGAATTAGCAAGCTTTCTAGACCAT
FMO01561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UbcE2H-RB | 2292 | CG2257-RB | 441..989 | 25..573 | 2745 | 100 | Plus |
| UbcE2H-RC | 2328 | CG2257-RC | 477..1025 | 25..573 | 2745 | 100 | Plus |
| UbcE2H-RA | 2894 | CG2257-RA | 578..1126 | 25..573 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8089312..8089860 | 573..25 | 2745 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 984..1035 | 24..75 | 107 | 67.3 | Plus |
FMO01561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:12 Download gff for
FMO01561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2257-RB | 413..971 | 17..577 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:42 Download gff for
FMO01561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc-E2H-RA | 571..1129 | 17..577 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:31 Download gff for
FMO01561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UbcE2H-RA | 571..1129 | 17..577 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:31 Download gff for
FMO01561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8089309..8089867 | 17..577 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:42 Download gff for
FMO01561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7983342..7983900 | 17..577 | 98 | | Minus |
