FMO01567.5prime Sequence
1219 bp (1012 high quality bases) assembled on 2008-03-21
> FMO01567.5prime
CAGTCGACATGGGAAATGCGAGTGGCAAGCGGGAGACGGATAATCTCTAC
AATTCGGAAGAGCTACGCATGCTGGAATCCGCGTACAAAAACGCCTCTGG
CGGAGCACTTGAGAAGTTGACCCAAGACAGATTGGTGGAAACTTGGTCGC
AAACCATCGAAAGATCCCTGGCCGAAAGTACGGCTCAGTATCTATTTACG
CCCACGAAGCCAGGTCAGCAATGTGTCAACCTTCAGCTGAAGAAATTTGG
AGAGCCCTACTACATCATGGAACGCGGTACTATTGACCAGAAAATGCAAA
TGCTCCTGGGCTCAATGGAGAGAAGTGGAAATGACACCTTCAACAGCAAG
CAATTGGAGCAATATATCTACTCGGTGATCAAGAGCTACGTGCACTTGGA
AAGTACAGCGAAAAACTCTGGCATCAAGGAGTGGCACGATCTTGGCTTTA
ACACCACGGAAAGGTCCGCCGCCACATTTGCCAAGGGCCTTATGAGAAAT
CTGGGCAAGGAGCTAGAGCACACTATGCCCAACGATGCCCTGGAACGTTG
GTTACACGTCACTCCGCAGTTTTTGCAGATTTGGCGCGAGGTCTTTAGCC
AGCTGTATTGTCGCCATGGTGGCAGCAAACGCAACATAATCAAGGAATGG
AAATTCCAATTCTGCCAGCACTGTGTGATGCTCCGCAAAATAGTCATTAT
CGCCCTATCATCGAACTACCTCACGTCCTGTATATCAATGCTCAGCTGCC
CCGCGAACATCGGCACAAATGGCGCTTTCTATTCTCATCGAAAATCAACG
GGGAAAGCTTCTCGACGATGTTGGGAAAAGTGCTGGACAAAGGACCAACG
CTGTTCTTTATTGAGGACGAGGATCAATATATATTGGGCGGCTACGCGTC
CGAAACGTGGTCCGTGAAACCGCAATTTGGAGCGATGACAGCTCATTGCT
CTACACCTAAGCCCTGCCATGCGTGCTTTCGCCACAACTATAACATCACT
ATCAGTATTTGAAATGATCAGCAAACTATGCCGAATGCCTGGGCATGGCG
TCAGTGATTTTGGGCCTTTGGAATGACTGCATCGGCATGACAAAGCGTGA
AGTGCACTACATATTCGAGACTACGTGCAGTGAAATAACGAACGTTCAAT
CGAACTGGATGGCCCTAGGGACTCAACGATAGGAACGACGGTTAGGGACG
AACGGTCATCAACACGCTC
FMO01567.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5149-RA | 1898 | CG5149-RA | 151..1297 | 9..1131 | 5070 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7385867..7386182 | 677..363 | 1530 | 99.7 | Minus |
2L | 23513712 | 2L | 7385436..7385805 | 1037..677 | 1395 | 96.2 | Minus |
2L | 23513712 | 2L | 7386424..7386649 | 362..137 | 1130 | 100 | Minus |
2L | 23513712 | 2L | 7387974..7388103 | 138..9 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:45:37 has no hits.
FMO01567.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:18 Download gff for
FMO01567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5149-RB | 140..1292 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:52 Download gff for
FMO01567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5149-RA | 145..1304 | 1..1138 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:12 Download gff for
FMO01567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5149-RA | 145..1304 | 1..1138 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:12 Download gff for
FMO01567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7385431..7385804 | 678..1041 | 96 | <- | Minus |
2L | 7385867..7386182 | 363..677 | 99 | <- | Minus |
2L | 7386424..7386648 | 138..362 | 100 | <- | Minus |
2L | 7387975..7388108 | 1..137 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:52 Download gff for
FMO01567.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7385431..7385804 | 678..1041 | 96 | <- | Minus |
arm_2L | 7385867..7386182 | 363..677 | 99 | <- | Minus |
arm_2L | 7386424..7386648 | 138..362 | 100 | <- | Minus |
arm_2L | 7387975..7388108 | 1..137 | 97 | | Minus |