FMO01568.5prime Sequence
961 bp (457 high quality bases) assembled on 2008-03-21
> FMO01568.5prime
CAGTCCACATGTCGACGCTGGAGCTGTGCGAAAAGTATTTTGGGACGCGC
GATGTGTACAAGCTAATGGAGCTGGCCCGGGGCGCCGGCGAGAAGGAGGT
GAAGAAGGCATACCACAAGCTCTCGCTGCTCGTTCATCCCGATCGAGTGC
CGGAGGAGCAGAAGGCGGAGTCCACCGAGAAGTTCAAGGTGCTATCGAAG
CTCTACCAGGTGCTTACCGACACGCAGAAGCGGGCGCTGTACGACGAGCA
GGGCGTGATCGACGACGACGATGAGAGCGAGTCCAAGCTGTCGTCGTGGC
TGGAGTTGTGGAGCAAAATCTTCAAGCCCATCACCGAGGAGGATATCAAC
GACTATGAAAAGGAGTATGTGGAATCGGAGCTGGAGCGCACCGATCTGAA
AAAGGCGTATCTGGGCGGCAAGGGTTGCATCAACTATCTGATGAACCATG
TGCCCTTCATGAAGGTGGAGGACGAGCCGCGCATTCAAAAGATCGTTCAG
GATATGATTGCCAGCGGCGAGGTGCCCGAGTACAAGATCTTTACCGAGGA
GCCGGCAGCCAAGCGCAAGAAGCGCCACCAGAAGTACGCGCGCGAATTCA
AGGAGGCCAAGGTGATCAAGGAGCGTTTGAAGCGCCGCCAGAAGGAGAAG
GACGACCAGGATTTAGCCGACAACGGTGGCGATTTGCAGCAAATGATCCT
GGCACGTCGCAATCAGCGCGAGTCAACTTTGGCTCCCTAATGGACCGCCT
GATGGAGAAGTACGGCACGAGGACGACTCCGACACTGTTGACTTCAGCGC
CTTCGAGAAGAAGAAAAAGAAGTCCTAGAGCCCGCCGCCAAGCAGAGACA
AACCGAAGCTCAATGGAGTCAAGCAGGCCGTGTGAGAAGTCAAAGACTCA
AGCTGTCTGACCATTCGTTTGACGTGCGGGACCAGTAGTCGATCATATCA
TATCATATCAT
FMO01568.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6693-RB | 1250 | CG6693-RB | 114..1001 | 9..889 | 4205 | 98.8 | Plus |
| CG6693-RA | 1372 | CG6693-RA | 236..1123 | 9..889 | 4205 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11220535..11221404 | 873..9 | 4055 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:36 has no hits.
FMO01568.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:19 Download gff for
FMO01568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1129 | 1..894 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:09 Download gff for
FMO01568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1129 | 1..894 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:04 Download gff for
FMO01568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1129 | 1..894 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:04 Download gff for
FMO01568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11220535..11221408 | 1..873 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:09 Download gff for
FMO01568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7046257..7047130 | 1..873 | 98 | | Minus |
