FMO01581.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-03-21
> FMO01581.5prime
CAGTCGACATGAAATCGTGGGAGATAGCTGTGGTGCTAGTCGCCGCTGTT
TACTTGTGTTCGCAAGTAAATTTCGTGGCCGGTCTGGAGTGCTATGTCTG
CTCCAACCAGACGGGCAACACGGAGAAGTGCCTGAACACCATCAAGACCT
GCGAGCCCTTTGAAAACGTCTGCGGAACGGAGATCCGCTGGGGATCCCAG
CCGTACTTCTCGGAGGGTGCTCTTAAGCAATACTACGTGTCCAAGAGGTG
CATGACCAAGGAGCAGTGCCAGTCCAAGAGGAAGCGCTATATGCAGCTGT
ACTGCACCCACATCTGGTACGAGGATTGGGCGTGCAACGAGTGCTGCAAG
GGAGATCGGTGCAACTACTTTGTCATTAGTGGCGCTCCTTCAAGACAAGG
CTATGGTGTCTGTTTAACCCTGCTCACCGCACTATTAGGACTTGGATCTT
GGCTCATTCCACGCTCTGCAAGCTTTCTAGACCAT
FMO01581.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cold-RB | 1032 | CG2813-RB | 73..531 | 9..467 | 2295 | 100 | Plus |
| cold-RA | 1093 | CG2813-RA | 134..592 | 9..467 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 574778..575090 | 65..377 | 1565 | 100 | Plus |
| 2L | 23513712 | 2L | 575144..575233 | 378..467 | 450 | 100 | Plus |
| 2L | 23513712 | 2L | 574641..574698 | 9..66 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:33:09 has no hits.
FMO01581.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:34 Download gff for
FMO01581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2813-RA | 119..591 | 1..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:25 Download gff for
FMO01581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cold-RA | 124..596 | 1..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:41 Download gff for
FMO01581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cold-RA | 124..596 | 1..473 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:41 Download gff for
FMO01581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 574631..574698 | 1..66 | 94 | -> | Plus |
| 2L | 574780..575090 | 67..377 | 100 | -> | Plus |
| 2L | 575144..575237 | 378..473 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:25 Download gff for
FMO01581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 574631..574698 | 1..66 | 94 | -> | Plus |
| arm_2L | 574780..575090 | 67..377 | 100 | -> | Plus |
| arm_2L | 575144..575237 | 378..473 | 96 | | Plus |
