FMO01589.5prime Sequence
1220 bp (999 high quality bases) assembled on 2008-03-21
> FMO01589.5prime
CAGTCGACATGAGCGGCGCTACACAGGAATTTTGTGTACGCTGGAACAGC
CATTTGGGCAGCATTGGAGCTGCTTTTCCGCAGCTGCTAGCAGGCCAGAG
ATTCGTGGATGTAACACTCGCATGCGAAGGCCAACAGGTGCACTGCCATC
GTCTGGTGTTGGCCGCTTGTTCCACCTACTTTGAGGCAATACTAGCGGAG
CATCCTTGCAAGCACCCGGTCATCATATTGCCCAGGGAGATCAAGCTATG
GGAGATCCAGGCGCTTGTGGACTTCATGTACAAGGGAGAGGTCAATGTCA
CGCAAGCCGGTCTTGGCCAGTTGCTTCGCTGTGCCGAACAACTGCAGATT
CGCGGTCTATACGGCTCTGAGGCACCGATAAACTACAAGAAACTCCAGCA
GGCGAGTCTCGAGGCTGCTAAGGATCCAGCTGCAACCACAGCGCGAAGCT
TCAAGCATGTGGACAGCGCGGAAACGGACGATGCAGCCACTAATTCAACC
ACCTCAACAACAATGACCACCTCCTCCGCTCCACCGCTACCGGTTAACCA
TCAGCAACCCACAGTATTGAAGCGCCAGAATCCCGATGCTCGGCAGCAGC
AGCAACAGCAGCAGCAGCAGCAGGTGCAGCAGCGACCCCAGATAAATGGC
AGTAATGCTCAACAGCCATCTAAGGCCACCTCTACGAACGTTTTGGGCAG
CCACTCGAATGCACCAACCGAGGATGACTCCGGCGACGAGGTGCCGAACA
ATTGGAATGCCTACGGGGAGCAATTCGATGATTGCAATATATCTGCGCAA
GCCGTTGACAACAAAATGAATGTCCACCTATCCCTGCAGCAGCGAGGATG
CAAATGCAGCTTCAGCAGCAGCAATACTTGGATTCAAATGTTGAGGACGA
CCACAACTATGTGGCCGCTCATGATGAAAACATGACAGCAGTTTGCGACA
GGAGGGCCATGCGATCCGGGCTATCCCTCAGCCTTGACCCTGATCCTCGA
TACATCGGCCATACTCGGAGGACTGGAGCCATAGCCTCGATCGATGGTTA
TACCTCATATAAGCCGCGTCGACGTTCAGAAGCATCTCTAGCACAGCGCC
AATGTGGTTTCGAAGGGCAGAACTCGACTTCAGCAATGTTCCAATCCGTT
CCACCATCGTTCTAATCCGCAAGATCTCTCTCCGGAGCGAAACTGTGAAC
GCGTGTGGTTCCTCCCATTC
FMO01589.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8924-RB | 2575 | CG8924-RB | 637..1752 | 9..1118 | 5170 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15942452..15943285 | 9..842 | 4170 | 100 | Plus |
| X | 23542271 | X | 15943348..15943601 | 845..1095 | 765 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:10 has no hits.
FMO01589.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:00 Download gff for
FMO01589.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8924-RA | 800..1924 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:09 Download gff for
FMO01589.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8924-RB | 630..1754 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:59 Download gff for
FMO01589.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8924-RB | 630..1754 | 1..1121 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:59 Download gff for
FMO01589.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15943350..15943601 | 847..1095 | 94 | == | Plus |
| X | 15942445..15943290 | 1..846 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:09 Download gff for
FMO01589.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15836478..15837323 | 1..846 | 99 | -> | Plus |
| arm_X | 15837383..15837634 | 847..1095 | 94 | == | Plus |
