FMO01592.5prime Sequence
1181 bp (1006 high quality bases) assembled on 2008-03-21
> FMO01592.5prime
CAGTCGACATGAAGCCCGTTGCCTTGATCCTGGTTTTCCTGGCCATTAGC
CAAGCCAGAGTACTCAACTTGCCCAAGGAGGCGATCGATATTCCTGTGGC
CATTGTCGAGGATAAGGAGCCACCAGTAGCTTTGTCTTTGGTCAAAGAGG
AAGTTAAGGCAGAGGAAGTTAAGCCAGAGGAAGTGAAACCAATTGCTCAA
GAAGAGAAAGCCAAGGATCTCAAGGAGGAAGTTAAGCCAGAAATTAAGCC
TGAAATCAAAGAGCAGCCTAAGCCTGATATAAAAGACGAGATTAAGGAAG
ATTTAAAGGCAGACATTAAGGAGGAGCTCAAGGAGAAGATTGAAGAGCAG
ATCAACGAGTTGCCTAATGCTAAGCCCCTGGAGCTGAAGGAAAAATCCCT
GGAAGCTGAGGAGAAACCTCAGGAAATCAAAGAAGAAGTTCAGCAGCCAG
AAATCAAAAAAGAGGCCACTGAAATCAAAGAGGAACCTGCTCAGAACATT
CTGAAATCTCTGCCAGCTGAAGAGACTGTCGTTGTGCCTGCCGAGGAACT
TTCCCCGAATCCGGTGGAGCAAGAGCAGTCGGAAAACCAGGACGCCGCGC
ATCCTCAGGTCCGTCAAGCCACCCAAGCCACGCCCACCCAGCAGAGCACC
ACCCAGGGCAACTTTGTCCAGCAGTTGATCCAGAACTCGCCAATTGGTCA
GTTCCTCAATCAGTTCCAGCCCCAGCCAGCTGCTGCTGCCGCTCCAGCAG
CAGCACAAGTCCAGGCGGATGATGCCGCCGCTGCGGCACCTGCACTCCGG
CTCCCACGGTGCCCGGTTTCCTGAATCCCCAGGCCGCCATCACCTCCGCC
CAACAAGCCGTGCAAAATGCGGCCCAAAGTGCCGTCAATGCCACCACCCA
GGCCTTCCAGGCCATCCACAGTTTGCCAGCACCTGGGCATCAGTTCCAGA
ACACCCTGTCAGCTGACTGTCAGCAGCAGCAGCGGTGTCCACCACTCCGC
GTCACAGTCCAATCAGCAGTTGTCAACATGTTTCGTGCATAACAATGCAC
GGCTGCCGCACGGCTGCCAGCAAGTGCATCCTCTGCAGGATATCACTCTG
GGCGCATCGTCCAGACGTACAGCGTGCCACAGTCACTCAGGCCAAATAGA
CGACGAAATGACAATCGCAATCTGCGTCGCC
FMO01592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1708 | CG1934-RA | 80..1184 | 9..1089 | 4850 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3511600..3512602 | 1003..9 | 4570 | 98.9 | Minus |
Blast to na_te.dros performed 2014-11-28 22:23:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..708 | 713..793 | 135 | 63 | Plus |
FMO01592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:03 Download gff for
FMO01592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1934-RA | 69..1188 | 1..1098 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:51 Download gff for
FMO01592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 73..1192 | 1..1098 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:07 Download gff for
FMO01592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 73..1192 | 1..1098 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:07 Download gff for
FMO01592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3511490..3512609 | 1..1098 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:51 Download gff for
FMO01592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3511490..3512609 | 1..1098 | 96 | | Minus |
