FMO01596.5prime Sequence
1162 bp (711 high quality bases) assembled on 2008-03-21
> FMO01596.5prime
ATAGTAGCGAAGTTATCAGTCGACATGGAGGCCACCTACTGGAGGGACGG
GAATGGCTCAATGCCCGCGCTCCCATGAATGGCAATAGTTCCGCCAACTA
TGGCCCTTATCGCGGCTATGACGGCTTTTTCGGCCAATTGGGCCAATCAC
AGATCCCAAATCAGACCCAAATGGGTCAAACTTTGAACGGCTCTGCCTCC
TGGTCGTTCCCCTCCATGTCCTCTGACTACCACCAATCCCCTGCTGCCCC
GCAGGCCAACTCTAACTGGAGCCGCGAAAGAGTCAACTGGAACAACGAAA
TGCGTCCCGACCCCTCGTATCAAGCTGAGCCAGGCAACACCATCAATCGC
TCGTGGCCCGGCAACGGCGGCCCTTCCGACGGGAGCCATTGGCCCACTCC
GAACTCATCCATGCAGGTGACATCGGGTGAAAGGGGACTGCCGGAACACA
TTCGCAAGGAGCTATCGCTCCTTGGCCCCGCCAAGCGCAAGTGGTTCTTT
CGCTATCTGGACACGGGCATCACCAATGAAAAGGCCCTTATGAAGGCCTC
GGAAAGACGCACCAGTCCGGTACGTTCTGAGTGGTACGACAAGTCAGTTT
CGGCTGACCGCGGACGCAGGCGTCCGGAGCAGCCGATTTCGGATGATCGC
GTTCGCAAGCGTGCGAATGATGATAACTCGTCAGGCGGTAGAGCCCATGA
GGATGTAAAGAAGCAGAGGGTCCCAGAGCCGTCATGGACCTCGAAACAGA
ATAGTATTACCATGGCAATAATGGCGGAAACTTATCCGGATTGCGAGCTG
ACTAATCAGCAATTGCATGAGATCGAAGCCGGCCTTGTGGAGGAGTTGAA
AGGGTTGGAAGTCCAGCATCAATTTTGGGGGCATTCATTTCTTACTGGAA
TGATCATGTTGTCTGCATGGACAGATCTCCCGCCAATGACTGGAGCATAG
CAATTTCCAAGATCACGGCGTTACGGGAAACTAATCTAATTGTTGTCGGA
AGATGAATATTTCGGCCCTAAAGGGCATCACCAGTCGATACCACGTTCAG
CTGATGACCGATAGGTCCGATTCAACTTTAAAAGACAAAATAGCGACCTT
CTGTCAAAACTTGAACTGGCCTATAACTCAGACCAAGGGATGGCAAGGTG
GTAATAATAACT
FMO01596.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9641-RA | 1933 | CG9641-RA | 78..1230 | 25..1160 | 4830 | 95.8 | Plus |
| CG9641-RB | 1669 | CG9641-RB | 45..966 | 255..1160 | 3745 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2975746..2976785 | 1057..25 | 4385 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:05 has no hits.
FMO01596.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:53 Download gff for
FMO01596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9641-RA | 75..1230 | 25..1162 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:53 Download gff for
FMO01596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9641-RA | 78..1233 | 25..1162 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:38 Download gff for
FMO01596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9641-RA | 78..1233 | 25..1162 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:38 Download gff for
FMO01596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2975630..2976785 | 25..1162 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:53 Download gff for
FMO01596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2975630..2976785 | 25..1162 | 95 | | Minus |
