FMO01617.5prime Sequence
936 bp (936 high quality bases) assembled on 2008-04-11
> FMO01617.5prime
AAAACAAAGTTATCAGTCGACATGAAAATTTCTCATGTATTTGTACAGCT
TCGGGGCATCATGCAATCACAAGTTCAAATGCAGACCATCAACATCCCAA
GACGCGTGGGGGCCATCAAATCCTGGACAGATATCATGGGAGTATCCATA
AATGTCTGCATAATCTTGTTTTTCTACTTCTTCGAAGCTTTCTACGTAAT
GCCACAGTTTTTGGGATTGTTTGGACAGGCGGTTCATTTTTTAGTCACCA
CTTGGATTGTCTACAATATTCTGGAAAACTTAAGGCTGTGCGTCACGACG
TTGAACACTGTGGACTCTTTGCCGCCGCAAATGCAGCAGCCAATGAAAGG
TGAAGAGCACCTGTGGCATTTTTGCAAAATATGCCAAAGGAATGTACCGC
CAAGGTCCTGGCACTGCAACATCTGTGATGCGTGCATTCTGAAACGCGAT
CACCACTGCAATTTTGTGGGCAACTGCGTGGGACACAATAATCAGCGATA
TTTCATATGGTTCTCATTTTACGCGGCCATCGGTAGCGCAGTGGCCTTAT
TTGATAACTTCATGTTGGCCCATAAGCACGGTGTTGGATTTTTTGATTTA
GTCAAAGCCAATTACATTATTTTTAATGCTTACATGAATCCTGGTAGAAA
AGAATTAGTGATATTCTATCGAATAGTCAGTGTCTTAGGTGTCAACATAT
TCGCCGTTCTCTTTCCAGCAGCACTGTTTTGCACCCAAGTAGTGACGGTC
ATCAAAAACTCAGTAATGCACGATTATTCTGATCGAACCTATGACCTTGG
ATTAGGGAATAATTTGACCCTGATCCTGGGAAGTCGGCGATTATGGACTT
GCCTATCGCCAAATATCAAAAGTCCCCTGCCCCACAATGGCACCCGATGG
AAATCGAAGCGTGCCGTCGCAAGCTTTCTAGACCAT
FMO01617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17197-RB | 1958 | CG17197-RB | 961..1857 | 22..918 | 4485 | 100 | Plus |
| CG17198-RB | 1958 | CG17198-RB | 961..1857 | 22..918 | 4485 | 100 | Plus |
| CG17198-RA | 1066 | CG17198-RA | 69..965 | 22..918 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25773435..25774331 | 918..22 | 4485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:11:36 has no hits.
FMO01617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:53 Download gff for
FMO01617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17198-RA | 69..965 | 22..918 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:44 Download gff for
FMO01617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17198-RA | 69..965 | 22..918 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:23 Download gff for
FMO01617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17198-RA | 69..965 | 22..918 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:23 Download gff for
FMO01617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25773435..25774331 | 22..918 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:44 Download gff for
FMO01617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21599157..21600053 | 22..918 | 100 | | Minus |
