FMO01623.5prime Sequence
845 bp (845 high quality bases) assembled on 2008-04-11
> FMO01623.5prime
AAAAAACCAAGTTATCAGTCGACATGGCTGCAAAACAAGAACCTGAACGG
TCCTCGCCGGAAATTAATGCCTGCAAGGTGATTATTAAAAGGTTGTTTTC
CAGTACCTATAAGAATATTGCTTGGGTTTTCTACGAGCCACTGGATCCGC
AACTGCTGGGCCTCCACGATTACCATGAGATTGTCCGGGAACCCATGGAT
CTGTCCACCGTGAGGCATCGTTTGAATACGGGTTGCTATCTCAGTGCCGC
GGATTTCGCCAAAGACATAAGGCTGATTTTCTACAACACCTATCTGTACA
CGAATCCCGATCACCTGTGCTACCACATGGCCAAACAGCTGCAGATCATC
TTTGAGGAGATGTACTCCCAGGTGCAGCTCTACATCTGCTCCAGCGGCAG
TAAAGTGCGTGCCGAGGAAGAGAGCTCCTCGGATGAATCGGACTCATCAT
CGCCGGAGGACGAGGTGAACGGCTCGGAGGTGTCCCCCTCCATAATGGGT
GCGCCCCCCTCATGTACTCCAACCACCGAATGTACTCCGACCCCCGATTG
GACTCCGCCGGCAACTTTGGAAACTTCGGAGCAGCAGGAGCCCTTTACAA
CCGAGGAGGACCTTGATCTGCACGCCAAGATTCAGCAGCTGGACGGCGAG
GTGCTGCTCCACGTCATCCATTTCATTCAACGCATGGAGGGCGCCGAGTA
CTGCAACAAGGAGCTGGAGTTCGACATCTGCAAACTGAAGGTGCACACCA
AACGCGGCATCCGTGATTATTTGGCCAGCAAGGGGTTCACCGGCAAAAGA
GTGGCCCGCACCAAGCCCAAATATAATGCAAGCTTTCTAGACCAT
FMO01623.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30417-RA | 843 | CG30417-RA | 26..829 | 24..827 | 4005 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23326753..23327556 | 827..24 | 4005 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:57:55 has no hits.
FMO01623.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:39 Download gff for
FMO01623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30417-RA | 1..807 | 24..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:15 Download gff for
FMO01623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30417-RA | 20..837 | 15..837 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:22 Download gff for
FMO01623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30417-RA | 20..837 | 15..837 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:22 Download gff for
FMO01623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23326745..23327562 | 15..837 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:15 Download gff for
FMO01623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19214268..19215085 | 15..837 | 98 | | Minus |
