FMO01631.5prime Sequence
629 bp (629 high quality bases) assembled on 2008-04-11
> FMO01631.5prime
CAGTCGACATGGCTTTGGGCAGCGAAAATCACTCTGTTTTCAACGACGAC
GAGGAGTCATCTTCGGCCTTTAATGGACCCTCTGTTATCCGGAGAAATGC
CCGGGAACGCAACCGCGTAAAGCAGGTCAACAATGGCTTCAGCCAACTAC
GACAACATATCCCTGCGGCCGTAATAGCCGATTTAAGCAATGGTCGCCGG
GGAATTGGTCCCGGCGCCAATAAAAAACTGAGCAAAGTTAGCACACTGAA
AATGGCAGTAGAGTACATACGGCGCTTGCAGAAAGTTCTTCATGAAAACG
ACCAGCAGAAACAGAAACAGTTGCATTTGCAGCAGCAACATTTGCACTTT
CAGCAGCAGCAACAGCATCAACACTTATACGCCTGGCACCAAGAGTTGCA
GTTGCAATCTCCAACTGGCAGCACAAGTTCCTGCAACAGCATTAGCTCTT
ATTGCAAGCCAGCAACATCGACGATTCCGGGAGCAACACCTCCTAACAAT
TTTCATACCAAGTTGGAAGCCAGTTTTGAAGACTACCGTAACAATTCCTG
CAGTTCTGGTACTGAAGATGAGGACATCCTCGACTATATATCACTCTGGC
AGGACGACCTGGCAAGCTTTCTAGACCAT
FMO01631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ac-RA | 917 | CG3796-RA | 64..666 | 9..611 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 370094..370696 | 9..611 | 3015 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 9927..10002 | 345..420 | 110 | 60.5 | Plus |
FMO01631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:14 Download gff for
FMO01631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3796-RA | 64..669 | 9..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:09 Download gff for
FMO01631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ac-RA | 64..669 | 9..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:38 Download gff for
FMO01631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ac-RA | 64..669 | 9..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:38 Download gff for
FMO01631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 370094..370699 | 9..615 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:09 Download gff for
FMO01631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 264127..264732 | 9..615 | 99 | | Plus |
