FMO01634.5prime Sequence
833 bp (833 high quality bases) assembled on 2008-04-11
> FMO01634.5prime
CAGTCGACATGGACGAATCTGAAACAGCTCCGAATGACGACTATGAGCAC
CCAGATGGACTCGATTACATATTGGAATCTGTGTTGATGCCCAGCGATGG
AAGTAAAGAATTCAAATTCTTGGCGGACGAGTACAATTCTGTTCTTTTGA
ACCCCTGTCACTGCAAAGGAGCCTGCGAAAACAGCGAAGTCTGTGCACAT
GGAGGCCAATATGAGTTCACAGAAGATGGCAGCGAATTAATTCTTCGGAA
TTCCGCAAATCCTGTCATTGAGTGCAATGACATGTGCAAATGCTGTAGAA
ACACGTGCTCCAATCGGCTTGTGTACTCAGGCCCGAGGAAACATTTGGAA
ATATTCGATTCGCCCGTGTACGGATCCAAAGGACTACGGACTACAGCGAA
AATTACAAAAGGAGGATACATTTGCGAATATGCCGGAGAACTTTTAACGG
TTCCCGAGGCAAGAAGCCGCTTGCATGATAATGAAAAACTAGGCCTGATG
AACTATATCCTGGTGCTTAATGAATACACTAGCGACAAGAAGCAACAGGT
GACCATCGTTGATCCATCAAGACGTGGAAACATCGGACGCTACCTGAACC
ACAGCTGCGAACCGAACTGTCATATAGCAGCTGTACGAATAGACTGTCCC
ATACCAAAAATAGGTATTTTCGCAGCAAGGGATATTGCGGCCAAGGAGGA
GTTATGCTTTCATTATGGCGGAGAAGGGCAGTATAAAAAGATGACAGGTG
GAAAGACTTGCCTCTGTGGTGCTTCAAAATGCACGGGTTTCATGCCAAAT
ACTGAAATAGAAGAAGCAAGCTTTCTAGACCAT
FMO01634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4565-RB | 866 | CG4565-RB | 19..825 | 9..815 | 4035 | 100 | Plus |
| CG6567-RB | 1017 | CG6567-RB | 801..942 | 802..661 | 710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10852742..10853397 | 9..664 | 3280 | 100 | Plus |
| 3R | 32079331 | 3R | 10853449..10853603 | 661..815 | 775 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:47:45 has no hits.
FMO01634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:02 Download gff for
FMO01634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4565-RB | 19..828 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:26 Download gff for
FMO01634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4565-RB | 19..828 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:07 Download gff for
FMO01634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4565-RB | 19..828 | 9..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:07 Download gff for
FMO01634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10852742..10853396 | 9..663 | 100 | -> | Plus |
| 3R | 10853452..10853606 | 664..819 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:26 Download gff for
FMO01634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6678464..6679118 | 9..663 | 100 | -> | Plus |
| arm_3R | 6679174..6679328 | 664..819 | 98 | | Plus |
