FMO01635.5prime Sequence
966 bp (897 high quality bases) assembled on 2008-04-11
> FMO01635.5prime
AAAGACAAAGTTATCAGTCGACATGCTTCGATTTCGAGTTTTATTAAGAT
CTACTTGCGGTTGGAGTAGAAGAATGTGTTTTCGAGCCGAGGAAGGGTTT
CATCGTCACTTTCAACTACATCGCATAAAAGTTATGGGCCTACTTCATCC
GTTTTGTGCAATATTTTTACTCTGTCTGATTGGATTGCTGTTTGTCTATG
AATTATGCTACGTTTTGCCGCAAATAACTGATCCCCATGGTATATGGCAC
AAATTGTGTTGGTTTATGGGAATTTATACAGTCATCAATATATTGGGCAA
CTGGTGGCTCGGCTGTATGACCAATACCTCAGTCGATAGCTTAGTTCTGG
AAAGACAGTATCCTGTGGCAGGTGAGGCTCACCTGTGGCACTACTGCTCC
ACATGCCAAAAGCTGGTGCCACCGAGGTCCTGGCACTGTAGTTTGTGCAA
CATTTGCATTCTGAAGCGGGATCACCACTGCACCTTCTTTGCCAGTTGCA
TTGGCCATAAAAATCAGAGGTATTTCCTTGCCTTCTTGTTTCACCTGAGC
TTTGGCAGCGGACAGGCGCTCGTCTACAATGGCATTTTGAATTGGACAAA
CAAGGCCTTTTTGGTCGTCGATCCTTTGTTGCTAATGTTCCAGGATACAA
CCCAAGATGCTGATTTCAAATGGAAGTACACAATCGCCAACCTTTTCAAA
CTGAAATTTATTTCTTTTTGGCGTCCCCCTCTTCATGTTCGTCTTTCAAA
TGATAATGGTATATCGGAATAGTACATGCTATAAGATGCTCGATCGCAGC
TATGATGTGAGTTGGAGAAGAAATTATGATATGGTCTTGGGAAAACGGCG
CTTCTGGATTTTTTTCTCTCCACGATCTCGAGTCCTCTTCTACCGATGGA
CTCATGGCTTCCAGAAGAGACTGTGGCAAGTTTTCTAGACATTCGTTTGC
CCGCGGGCCCAGGAAG
FMO01635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4956-RA | 1038 | CG4956-RA | 77..982 | 23..925 | 4290 | 98.7 | Plus |
| CG17197-RB | 1958 | CG17197-RB | 429..531 | 417..519 | 215 | 80.6 | Plus |
| CG17198-RB | 1958 | CG17198-RB | 429..531 | 417..519 | 215 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25777362..25778229 | 890..23 | 4185 | 99.3 | Minus |
| 3R | 32079331 | 3R | 25774839..25774941 | 519..417 | 215 | 80.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:31:34 has no hits.
FMO01635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:04 Download gff for
FMO01635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4956-RA | 77..985 | 23..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:05 Download gff for
FMO01635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4956-RA | 77..985 | 23..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:42 Download gff for
FMO01635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4956-RA | 77..985 | 23..929 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:42 Download gff for
FMO01635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25777316..25778229 | 23..934 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:05 Download gff for
FMO01635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21603038..21603951 | 23..934 | 98 | | Minus |
