FMO01637.5prime Sequence
473 bp (473 high quality bases) assembled on 2008-04-11
> FMO01637.5prime
CAGTCGACATGATGGCACGTCCCGAGGAGCAGAAGTCTCATGTTGGAGCA
AAGTCACGATCTCATCAGTATCGAGAGGTTTTTAAGCCAATGATGGAGAG
GAAGAGGCGGTCACGCATCAATCGCTGCCTGGACTTTATTAAGGACCTGC
TTCAGGAGGTGTCGCATCTGGACGGCGAGACCATGGCCAAAATGGATATG
GGAGATGTCCTGGAATTGGCAGTTCACCACCTGAGCAAGAAAAACTGTCC
GGTGGCCACGCCCACCACAGCGCCTACATCCGGAGTATATCAGAGCCCAA
TTGATTGCTATTGGAGTGGCTTTCGAGAATGCGTCCTGGAAGTGTCCCAA
TTTCTGCAACACAACGGCTATCAGCCGAGTTTCGAATTTGCGAAAGAATT
GGATCATCTTGTGGCCTCCACATCCAAATCCAAGCCAAATCTCTGGAGGC
CCTGGGCAAGCTTTCTAGACCAT
FMO01637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Her-RA | 614 | CG5927-RA | 25..471 | 9..455 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18204546..18204831 | 455..170 | 1430 | 100 | Minus |
| X | 23542271 | X | 18204958..18205120 | 171..9 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:31:57 has no hits.
FMO01637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:25 Download gff for
FMO01637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5927-RA | 1..450 | 9..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:18 Download gff for
FMO01637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Her-RA | 18..471 | 1..455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:53 Download gff for
FMO01637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Her-RA | 18..471 | 1..455 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:53 Download gff for
FMO01637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18204546..18204830 | 171..455 | 100 | <- | Minus |
| X | 18204959..18205127 | 1..170 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:18 Download gff for
FMO01637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18098579..18098863 | 171..455 | 100 | <- | Minus |
| arm_X | 18098992..18099160 | 1..170 | 97 | | Minus |
