FMO01640.5prime Sequence
545 bp (545 high quality bases) assembled on 2008-04-11
> FMO01640.5prime
CAGTCGACATGGCCGTTCAGGGTCAGAGATTTATGACCAAGACTCAGCAT
TACCGCAAGGTGACCAAACCCCTCCTGGAGCGCAAAAGACGCGCCCGGAT
GAACCTGTATCTGGACGAACTCAAGGATCTCATCGTGGACACCATGGATG
CGCAGGGCGAACAGGTCAGCAAGCTGGAGAAAGCTGACATCTTAGAGCTC
ACCGTCAACTATCTGAAAGCGCAACAGCAGCAGCGAGTGGCCAATCCTCA
ATCCCCACCACCCGACCAAGTTAACCTGGACAAATTTCGGGCCGGATACA
CCCAGGCTGCCTACGAGGTCTCGCACATATTCTCTACGGTTCCCGGCTTG
GATCTCAAATTCGGCACCCACCTGATGAAGCAATTGGGTCACCAGCTCAA
GGACATGAAACAGGAAGAAGAAATCATCGATATGGCCGAAGAACCAGTTA
ATCTAGCCGACCAAAAACGTTCAAAGTCTCCGCGAGAAGAGGATATTCAT
CATGGCGAAGAAGTCTGGCGCCCCTGGGCAAGCTTTCTAGACCAT
FMO01640.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)mdelta-HLH-RA | 1013 | CG8328-RA | 112..630 | 9..527 | 2595 | 100 | Plus |
| E(spl)m3-HLH-RA | 1305 | CG8346-RA | 210..382 | 33..205 | 235 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25997732..25998250 | 9..527 | 2595 | 100 | Plus |
| 3R | 32079331 | 3R | 26022032..26022204 | 33..205 | 235 | 75.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:48 has no hits.
FMO01640.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:31 Download gff for
FMO01640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8328-RA | 108..635 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:48 Download gff for
FMO01640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)mdelta-HLH-RA | 108..635 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:31 Download gff for
FMO01640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)mdelta-HLH-RA | 108..635 | 1..532 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:31 Download gff for
FMO01640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25997728..25998249 | 1..526 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:48 Download gff for
FMO01640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21823450..21823971 | 1..526 | 99 | -> | Plus |
