FMO01647.5prime Sequence
690 bp (539 high quality bases) assembled on 2008-04-11
> FMO01647.5prime
ATAAAACCAAGTTATCAGTCGACATGACGGATCAACTGCTGACCTCCACG
GGCGGCGTACCGGGTGATCCACCGCCAGTTTTGGTGCCCGTATCAGCCAC
CACCGGTGGACCCTATTTGAGCGGTGGATCCGAGGGCGAGGCGGAATCAT
CGGAACAGCCCGTTCTTCTAGAGCTCGGTGCCCCTCAATCGTCCAGTTGT
CCGGCAGTTAGTCTCAACTACACCCTAACCGCGGATGGAGCAGGCTTGCT
GGCATATGCGCCAACTCATCCGCATAGCTACTCACCCAGCGTGATGGGTG
GCTACGAGAAGGAAGCGCACAATATGGGTCTGTTGCCACCCACATATAGC
GTTATACCTCATCCGGTGTCGATGTGGCATGCTGGCCAGGTGGCCACCGG
TTCGCCAGTGGGCTTGGAATGCAACAAACCCAGTGAGCTGGTACCTCCGC
CCATGTATATGAGCTATAGCGGCGGTAGTATAGCCAATATCACTGAGGTG
GACATCGCCAAAGAGCACAATCCCGCCTGGCGGGAGAAGGCACTGCAAAT
GGAGAAGGACTATAGACGCACCGCCTGCGATCGGGAAAGAACAAGTATGC
GGGACATGAACCGAGCCTTTGACTTACTGCGCTCCAAGCTACCCATATCC
AAACCAAATGGGAAAAAAGTACTCCAAAATCGAGAGTTTG
FMO01647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sage-RC | 1428 | CG12952-RC | 401..1066 | 24..690 | 3190 | 98.7 | Plus |
| sage-RA | 1105 | CG12952-RA | 78..743 | 24..690 | 3190 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9263077..9263742 | 690..24 | 3165 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:31:54 has no hits.
FMO01647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:21 Download gff for
FMO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12952-RA | 1..666 | 24..690 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:16 Download gff for
FMO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sage-RA | 71..743 | 12..690 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:52 Download gff for
FMO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sage-RA | 71..743 | 12..690 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:52 Download gff for
FMO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9263077..9263749 | 12..690 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:16 Download gff for
FMO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5088799..5089471 | 12..690 | 97 | | Minus |
