FMO01651.5prime Sequence
845 bp (845 high quality bases) assembled on 2008-04-11
> FMO01651.5prime
CAGTCGACATGCCTGAGAAACAAGTGGCACCTGTAATTAGTAATCTCGAG
GATTTTGCGAATAATTTACCTGGGTATCTAATTTCTGAAAGTCCAGTTGC
CGTACTCCTGGACTACGATGGCACCCTAGCTCCCATTGCGGATAATCCAG
CGAAGACCAAAATGCCCGTGGAACTGGAGGCCATACTGCACAAGATAGCC
AAGCATCCCAAAGTTTTTCTCGCTGTGATCTCGGGTCGCGGACTGAAAGA
TGTGCAAAAACAAGTAAATATCGATGGCATTACATATGCTGGTAATCATG
GACTGGAAATCGAGTATCCCGATGGCTCCAGGCACGATTACGAGCTACCC
ACGGAGATCCAGAAAAACTACACACAAATGGTTAGGGAGCTCAAGGAGAA
GGTGGAGAAGAATGGAGCCTGGGTGGAGGATAAGAAGGTGTCACTCACCT
ACCACTACAGAGATACGCCCGCAGCCCTGAAGGATCAGCAAAAGCAGTTG
GCTTCGGAGATCTGCACAAAGTTCGGATTCCGTGCGAATCAGGCCCATGA
AGCCATCGAAGCTAAGCCCCCAGTGAATTGGAACAAGGGAGAGGCTGCCG
TGTATATTCTGAAGCAGAAATTCGGGGATAATTGGTCGCAGAAAGTGAGT
GTGGTCTTTGCGGGCGATGACACCACCGATGAAGATGCCATGAGAGTGCT
TCGAGGCTTGGGTCGCTCGTTTAGAATTTCTGCTGATGCCCAGATTCAAA
CTTATGCGGATTTCCGGTTGCCCAAGCAGGCTGTAATGACCGATCTTCTC
AAATGGATAGCCAATGTGTATGTTTCTGCAAGCTTTCTAGACCAT
FMO01651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5171-RF | 1182 | CG7-RF | 199..1017 | 9..827 | 4095 | 100 | Plus |
| CG5171-RE | 1137 | CG5171-RE | 154..972 | 9..827 | 4095 | 100 | Plus |
| CG5171-RD | 1156 | CG5171-RD | 173..991 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7403541..7404166 | 73..698 | 3130 | 100 | Plus |
| 2L | 23513712 | 2L | 7404230..7404361 | 696..827 | 660 | 100 | Plus |
| 2L | 23513712 | 2L | 7403297..7403364 | 9..76 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:42 has no hits.
FMO01651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:51:53 Download gff for
FMO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5171-RC | 149..973 | 3..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:21 Download gff for
FMO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5171-RA | 143..967 | 3..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:45 Download gff for
FMO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5171-RD | 167..991 | 3..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:45 Download gff for
FMO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7403291..7403361 | 3..73 | 95 | -> | Plus |
| 2L | 7403542..7404163 | 74..695 | 100 | -> | Plus |
| 2L | 7404230..7404366 | 696..832 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:21 Download gff for
FMO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7403291..7403361 | 3..73 | 95 | -> | Plus |
| arm_2L | 7403542..7404163 | 74..695 | 100 | -> | Plus |
| arm_2L | 7404230..7404366 | 696..832 | 97 | -> | Plus |
