FMO01655.5prime Sequence
1226 bp (1015 high quality bases) assembled on 2008-04-11
> FMO01655.5prime
CAGTCGACATGGGTCGCAAATTCCAGAATAAGAAAAAGAAGGCCGCGCCG
CAGCTGGAGATAGTGCCGCTGGATGAAAATCCACCACTGCCGCCACAGAG
ATCGTCAGATGATGTGGTGCCCAAAAAGGAAAAATGGGTGAACAAACAGC
GCGTGCTGGTCTTCTCCGCCCGCGGTATTAGCCACCGGGACCGGCACTTA
ATGAAGGATATTAAGACCCTAATGCCGCACCACCGACCCGAATCCAAAAT
GGAGCGCTCCAAAACCTTGTCGGTGGTCAACGAAATGTGCGAAATGAAGC
ACTGCAACAAGGCGATGCTGTTCGAGGGACGCCGGAAAAGGGATCTGTAC
ATGTGGATATCCAACACCTCGGGATCGACTGGTCCATCCGCTAAATTCCT
CATCGAAAACATTCATACAATGGCCGAACTGAAGATGACGGGAAACTGCT
TGCGGGGATCACGTCCGCTGCTCTCGTTTGACTCCAAATTCGACGAGCTG
CCGCACCTTAAGCTGCTCAAGGAGCTGTTCGTGCAGACCTACTCCGTGCC
CAACCATCATCCCAAGAGCCAGCCCTTCGTCGATCACGTTTTCACCTTCA
CCTACCTGGACAAACGCATCTGGTTCAGAAATTTCCAGATTCTATCCGAA
GATGGCGGTTTGTCCGAAGTCGGGCCGCGTTACGTGATGAATCCTGTAAA
AATATTCGATGGTTCCTTCACTGGCAAAACCATTTGGGAGAATCCGGACT
ACGTGAGTCCATCCAAACAGCGGCAGGTACTTAAGAAGGCTGCCAAGGAT
AAGTACGTGAACCGAGTGAGCAAAAGGTCAAGCACGAGGCCACGCGACCT
ATTAGAGCCTACGATGGCATGGATAACGATGAGCTATTCGAGGACGATGA
TCCCGTGAGACGGCCAGATACTGGCTGCGATAGCCAAAAGAGATGAGAGC
CGCCAACAAGACACCCAAATCGCGCTGACCAGAAGATCAAGGAGAAACAA
CTGCAGCCGTGAAGATGTGATTGAAGAAGAAGCAAGAACCATTAAACGGG
TGAAAAGGTGCAGCTTTCTTAGACATCGTGGCCCGCGGGCCCAGTAATGG
TCATATCATAATCTAAATCATATCTATATCCCAACTAGCCTAAGGAATCT
GGCCATGACCTTGCTTGGAATTCCCACAATAAAACGCCCGGTGGCACACC
GAGACGCTCTTCTGAACACAAATGCA
FMO01655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11583-RA | 1253 | CG11583-RA | 89..1151 | 9..1056 | 4890 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4281606..4282550 | 1056..127 | 4015 | 97.5 | Minus |
| 3L | 28110227 | 3L | 4282609..4282729 | 129..9 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:34 has no hits.
FMO01655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:01 Download gff for
FMO01655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11583-RA | 70..1136 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:22 Download gff for
FMO01655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11583-RA | 89..1155 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:30 Download gff for
FMO01655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11583-RA | 89..1155 | 9..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:30 Download gff for
FMO01655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4281604..4282548 | 129..1057 | 97 | <- | Minus |
| 3L | 4282610..4282729 | 9..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:22 Download gff for
FMO01655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4281604..4282548 | 129..1057 | 97 | <- | Minus |
| arm_3L | 4282610..4282729 | 9..128 | 100 | | Minus |
