FMO01660.5prime Sequence
905 bp (825 high quality bases) assembled on 2008-04-11
> FMO01660.5prime
TTAAACAACAAAGTTATCAGTCGACATGGCGTCCGAAGAGCGGGATGGGG
ATGTCCTGCTCCAGTTGCATCCCGAGGAAGTCGTGGAAACTGACCCACAG
CTGCCCGAGGAAATCGAGCGCTGTTCTGGACTAGATTATAACGATTTTTT
CTGGCGCTACATGCACAAGAACATACCGGTCATCATAGCCAATGTGTCTA
ACGACTGGGAGTGCCAGAACTGGACTGTAGGCCAGTCCAGTCCAGAGTCG
CGGGATCTCAACTCCAATCCGAGTGCATCTTCCATCAACTTTGACTACCT
CAAAACCAAGATCAGCGATGGCCCGGTTCCAGTTGCCAATTGCAATTCGT
CGTACTTCAATAGTCACACCAAACTGGAGCTCAACTTCCACGACTACCTG
GCCAAGTGGAGGAGTAGCATCGAAAGTCAATCGTCAGCAGCGTGGACGTC
GGCGGAAGTGAATAGTAATGTGGCTCCCGCGAGCGGGGACAATCTCTACC
TCAAGGACTGGCATCTGGCTGCCCAAATGCCGGGCTATAACTTCTACAAG
GTGCCTAAATACTTTGCCTCCGACTGGCTCAACGAACAACTGATTCAGCA
GGGGAAAAGACGACTATTCGATTCGTCTATATGGGGCCCAAGAACTCATG
GACCTCCTATCATGCGGACGTGTTTGGGCTCCTTCAGTTGGTCCACCAAT
ATAGTGGGCCTTAAGAAATTGGCTGGATAATGCCGCCGGGAGAAGAACTT
CAACTCAAACGATCGCTTGGGGAAACCTGCCCTTTAGTATAGACGAGGAA
AATGCTGGATGAGCACAACGGTGCGATATTACACCATTAATCAGCGGGCC
AATGAAAGCTTGTTTTCGTGCCCAGTGCTTGGTTTTCATCAAGGTTGTGG
AACCT
FMO01660.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7200-RB | 2041 | CG7200-RB | 665..1530 | 26..905 | 3990 | 98 | Plus |
| CG7200-RA | 1517 | CG7200-RA | 141..1006 | 26..905 | 3990 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18157917..18158540 | 651..26 | 3030 | 99.7 | Minus |
| 2L | 23513712 | 2L | 18157638..18157864 | 885..650 | 675 | 93.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:24 has no hits.
FMO01660.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:25:07 Download gff for
FMO01660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-RA | 129..1002 | 18..905 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:17 Download gff for
FMO01660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-RA | 133..1006 | 18..905 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:26 Download gff for
FMO01660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-RA | 133..1006 | 18..905 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:26 Download gff for
FMO01660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18157621..18157863 | 651..905 | 93 | <- | Minus |
| 2L | 18157918..18158551 | 14..650 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:17 Download gff for
FMO01660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18157621..18157863 | 651..905 | 93 | <- | Minus |
| arm_2L | 18157918..18158551 | 14..650 | 98 | -> | Minus |
