FMO01670.5prime Sequence
1231 bp (992 high quality bases) assembled on 2008-04-11
> FMO01670.5prime
CAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCTGGAGCGCC
CATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTTTCGGCAGC
CCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACTGACGGCTA
CCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGGCCGGAATT
GCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTATCTGCTGG
TCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGGACTGCCCA
CCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGGGCATGAAG
GCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCTGATGTGGT
CGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTATCTGAAGA
GGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCATTGTTTTC
GATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAACTGTGCCGA
AAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGATGACTTTG
CCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACAAGGTGTTC
CAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAGCCGGAGAT
CGTCATCTCAGAGGATGAGGAGTACAAGCGGGTGAATTTTGACAAGTTTG
GACAGTTGGCCACCGTTTTCCAAGGGAAAATGGCACTGTGACAGCCGGAA
ATGCATCCACCTTGAATGATGGCGGTGCCGCCGTGGTTTTGATGAGTGCC
GAGGCAGCTCAGAAGCGGGCATTAAGCCGCTGGGCAGGATGTGGCTTCCA
GGATGCGGAGACGATCCCATTGACTTCCCATTGCCCAGCTCTGGCCATTC
CCAATTACTGAAGCGTGCGGCGTTCGCAAGGAAGACGTGGCCCATGTGGA
AGGTCAATGAGCCTTTCTTCCTGGTCGTTTTGGGCAATATACAGAACTGG
AGTGTGATCCAGCAAAGTTAATGTCTATGGAGAGGTGCCCGTTCAATTGG
CATTCATCGGCATGTCCCGAGCCGCTGTGGTGCCCATCTTCGACAACGCG
GAAAGGCGAGCTGGGATGCCTCCATTTGCATGCGGCCGGGGGCCCTCCTC
ATTTCTCGAGAACGACGGGGAGACTCTTATC
FMO01670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..1333 | 9..1207 | 5015 | 95.4 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..1333 | 9..1207 | 5015 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887631..7888670 | 1040..9 | 4600 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:48:31 has no hits.
FMO01670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:07 Download gff for
FMO01670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 83..1122 | 9..1040 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:24 Download gff for
FMO01670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1155 | 9..1040 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:51 Download gff for
FMO01670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1155 | 9..1040 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:51 Download gff for
FMO01670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887631..7888670 | 9..1040 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:24 Download gff for
FMO01670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781664..7782703 | 9..1040 | 98 | | Minus |
