FMO01674.5prime Sequence
1210 bp (938 high quality bases) assembled on 2008-04-11
> FMO01674.5prime
ATAATACGAAGTTATCAATCGACATGCTAGCGATGCACAGGTGGATCCTA
CTGCTGCTGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGA
GTTGTCCTGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCT
GCGTGGACATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTG
CCGTGTACGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGG
TGCCTGTCCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGC
AGTGCCACTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGC
CTGCCGGCGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTG
CCAGCGGGCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCC
TTAACCAATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCA
AGCTGTCTAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCAATTTGCCT
GACAAAGACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACA
ACATGACCAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCAC
AGTTCGCCGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCA
CCTCTGCGTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGG
TGGCCAAGGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGG
ATCACTTGCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAG
TCGAATGCCGGATGCAGCCCATGGACCAGAGAATGCCACAGCATCCATTG
ACCATCCCATGGTGTGCATTGGGGCGAGTGCTCCTGCAGTAAGACCATCG
ACTGTGGAAACAAGTGCGTTTTGTGAGAACTCGCAACGAATATCAACTAA
GAGGCTTTGTGCTTCCTTGAATCAGTCCATGATTCATTATGCAGCCTTTC
TAGACAATCGAGGCGGCGGGCCAGGTAAGTGACTATCTATCTTAATCTAT
CATAATCCACCTAGCCTAGGAATCCTGGCATGACATGGCCTGGAATCACA
ATAAAAGGCACTGGGCGACCGGAGATCTGTAAACAATTCAAGAATGGATC
TCGTAGAGAT
FMO01674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-RA | 1172 | CG11674-RA | 75..1081 | 22..1018 | 4705 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14225332..14225805 | 495..22 | 2370 | 100 | Minus |
| X | 23542271 | X | 14224747..14225270 | 1011..496 | 2090 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:47:43 has no hits.
FMO01674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:12 Download gff for
FMO01674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 78..1096 | 17..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:24 Download gff for
FMO01674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 73..1091 | 17..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:05 Download gff for
FMO01674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 73..1091 | 17..1026 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:05 Download gff for
FMO01674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14224728..14225270 | 496..1026 | 96 | <- | Minus |
| X | 14225332..14225807 | 17..495 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:24 Download gff for
FMO01674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14118761..14119303 | 496..1026 | 96 | <- | Minus |
| arm_X | 14119365..14119840 | 17..495 | 99 | | Minus |
