FMO01675.5prime Sequence
848 bp (848 high quality bases) assembled on 2008-04-11
> FMO01675.5prime
AAAATACGAAGTTATCAGTCGACATGCCGGGCGTTGAAACGATCAAATCC
TCCTGGGCGGACGAGGTGGAGCTCGACTATGGTGGACTACCTCCGACGAC
GGAGACGGTGGAGAACGGACAGAAGTACGTGACGGAGTACAAGTACAACA
AGGACGACAAGAAGACGAAGGTGGTGCGCACGTACAAGATATCCAAGCAG
GTGGTGCCCAAGACGGTGGCCAAGCGACGCACCTGGACGAAGTTCGGCGA
CTCGAAGAACGACAAGCCCGGCCCCAACTCGCAGACGACCATGGTGTCCG
AGGAGATCATCATGCAGTTCCTCAACTCCAAGGAGGACGAGAAGGCCAAC
GATCCGCTGCTAGATCCCACCAAGAATATTGCCAAGTGCCGTATCTGCAA
CGGTGAGCATTGGTCGGTCAACTGCCCGTACAAGGGCACGGCGATGGACA
CGAATATGATGGAGAAGAAGGCTTCGGCAGCCGCCGCGGCCGCCGTCGAT
GCGCCCAAGTCCGGCAAGTATGTGCCGCCGTTCCTCAAGGACAGCCAAAA
GGGCGCGCTGGGAATGCGCGGACGCGACGACACGGCCGCCATTAGGATAT
CGAATCTGTCGGAGTCGATGACCGAGGCGGATCTCGAGGAGCTGGTGAAG
AAGATTGGACCGCAGAGCAAGATGTATCTCGCCCGCGACAAGAACACCGG
ACTCTGCAAGGGATTCGCCTACGTGCACTTCAAGCAGCGCAAGGATGCGG
CCGCCGCCATCGAGATCCTCAATGGACACGGCTACGACCACTTGATCCTC
AGCGTCGAATGGTCGAAACCCCAGAACAATGCAAGCTTTCTAGACCAT
FMO01675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8636-RA | 1027 | CG8636-RA | 92..898 | 24..830 | 4035 | 100 | Plus |
| CG10881-RA | 979 | CG10881-RA | 672..878 | 618..824 | 570 | 85 | Plus |
| CG10881-RA | 979 | CG10881-RA | 156..481 | 123..448 | 385 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2609376..2610182 | 830..24 | 4035 | 100 | Minus |
| 3R | 32079331 | 3R | 20408936..20409142 | 618..824 | 570 | 85 | Plus |
| 3R | 32079331 | 3R | 20408420..20408745 | 123..448 | 370 | 74.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:05 has no hits.
FMO01675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:13 Download gff for
FMO01675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8636-RA | 112..929 | 14..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:05 Download gff for
FMO01675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8636-RA | 86..903 | 14..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:43 Download gff for
FMO01675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8636-RA | 86..903 | 14..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:43 Download gff for
FMO01675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2609371..2610186 | 19..838 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:05 Download gff for
FMO01675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2503404..2504219 | 19..838 | 99 | | Minus |
