FMO01676.5prime Sequence
1193 bp (1015 high quality bases) assembled on 2008-04-11
> FMO01676.5prime
CAGTCGACATGGACTTTATCGACGACTTCATCGAAGAATACAAAAGCAAT
CCGTGCTTGTGGAAGGCGGACTCGGCGGACTTCAGGAACCGCAGCCGCCG
GCAGGAGGCCTACGCGAAGCTCATCGAGGTGGCCACCAAGCACGGGGAGA
TGTACAATGTGGAGCGAACAAAGCAAAAGATAAACAATCTGCGCTGTGCA
TTTCGTCATCAGCTGAGGAAATACAACGAGGTCAAGAAAAAGGGCGAGAA
GTACGAGCCCTACTGCCCCAAGCGCCGCTACTTCGAGTCCCTGATGTTCC
TTAAGGACGAGGAGATCCCCGCCGACAAGAAGTTCAAGCGCGAGCAGTCG
GTCTGCCTGGACAACTCCATGCAGCTAGGGGCGCCAGAGAACGGCGACGA
GTATTCCGACGCCGAGAGCCTGCACAAGCCCCCAAAGCCGACGGCAGACT
CGATCAAGATGTCACCCAACAACAGCGCCAACGAATTCTGTGCCAACATC
TTCGAGGAGGCCGCCGCCGCCGCTGCCGCTGACCCCGTTATCAGTATTAA
AACAGTCAACAACGCCAACAGCCATGCCAGTGGCGCTACTATCAAGGAGG
TCGAAATCGTGGTGCCTGCTAACAACAGGCTGCTGTCCGCCCGCAGAAAA
TCCGTGCCCGACTCCATAAAGTCTCCGCCTGGCGACTCCGAATCGCCGCA
GTGCAAGCGCATCGTCACCCAGAACCAAACGAAACTGATCAGTAATCAGA
GCCCGAGCCAGAAAGCCAATCACATAACACGGAAAAGGTCCTCCTCGGTC
TCTTCGCAGATTTCGGAGGACAACGAGCCGCCTCCAGGTAAATTCCGAGC
GGACATTTCCACCATTGACTTTGAGCGCCTCTTTCGCTGGCCCTAAAGAG
TGCGGACAGCCAGCTGGACGACCACTTCTCCAACTTCGGGAAATTATCGC
ACACAAGCTTCGCTCATGGACGAACACAGCTATCTACGCGGAAAAGATCA
TCGCGATGTGCTGTACAGGCAGATGAAATGCTGTCTCGCTGAATAACCCA
GTTTATGGGCGGGACAATGCACAGTACTAGAGAGCCAAGTAGCAAGCCTT
CTAAACATCGTTGGGCGCGGCCCAGGTATGCTAACTAATCTAATCTAATC
AAATCCACTAGCAGAGAGAGATCTCGGCATATGAAACTATGGC
FMO01676.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-RA | 1239 | CG3163-RA | 62..1158 | 9..1087 | 5040 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24029378..24030391 | 9..1016 | 4770 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:30 has no hits.
FMO01676.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:15 Download gff for
FMO01676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 58..1154 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:43 Download gff for
FMO01676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..1158 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:21 Download gff for
FMO01676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..1158 | 9..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:21 Download gff for
FMO01676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24029378..24030474 | 9..1087 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:43 Download gff for
FMO01676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19916901..19917997 | 9..1087 | 98 | | Plus |
