FMO01677.5prime Sequence
1239 bp (1046 high quality bases) assembled on 2008-04-11
> FMO01677.5prime
CAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCATCTCCTGC
CTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAATCGCCTAAA
GTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGCCGCTGTCC
TCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGGTGCTGTGG
CGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCATGCCTACTC
CGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGCCCACGTTC
TGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCAGCTTGGAC
CTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAGAGGGACTC
CATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAGCTATCACT
TCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTGTCTCCTTC
ACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTGCGAAACCT
GAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGTAGCGCACC
GACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACATGACCTCC
AAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTGTTCCACCA
GGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGAACTGCCAG
AGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGTATGGCCTG
CCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCGCGAATCCA
TCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCACGCCGGCT
TCACCCTTCTACTCCGCCCCAACGAGCTGTTCTTCCCAACTCAAAGTTCT
CTGGGGACCAGGTGAAGGGATCGCTCCAGCAGCAGCTGCGACACTTCTTC
TTCGAGATCACGCCGCTTCGAACTGGCACCATGTTCGTGTGCTTCGATGA
CCGAAGACTGTTGCCCGACAACGTTCATACGACCCGGAGCGAGAATCTGG
ATTTCAACATTGCTTGAATTGCCTGGAGCTGCGCGCGGCGCACCTCTTGG
GCGATCATTCGATGTGAACTACGTTTCACCGGGAATCGTACGCCTCATGG
ACACGCGGCACATGTGGTGACAGATGGTGGCCGTCGCAT
FMO01677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..1276 | 9..1189 | 5340 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464736 | 9..1150 | 5130 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:01 has no hits.
FMO01677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:17 Download gff for
FMO01677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 211..1366 | 1..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:59 Download gff for
FMO01677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 78..1233 | 1..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:31 Download gff for
FMO01677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 78..1233 | 1..1150 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:31 Download gff for
FMO01677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463581..7464736 | 1..1150 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:59 Download gff for
FMO01677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351086..3352241 | 1..1150 | 97 | | Plus |
