FMO01678.5prime Sequence
479 bp (479 high quality bases) assembled on 2008-04-11
> FMO01678.5prime
CAGTCGACATGTCCAGCCTGCCACGTCGCATCATCAAGGAGACTCAACGT
TTGATGCAGGAGCCAGTGCCTGGGATCAATGCCATTCCCGATGAGAACAA
TGCCCGTTACTTCCATGTGATCGTGACCGGACCGAACGATTCGCCCTTCG
AGGGCGGCGTGTTCAAGCTGGAGCTGTTCCTACCGGAGGACTATCCAATG
TCAGCGCCCAAAGTGCGCTTCATCACGAAGATCTACCATCCGAACATCGA
TCGTTTGGGCCGCATTTGCCTCGACGTGCTGAAGGACAAGTGGAGTCCAG
CCCTGCAGATCCGGACCATATTGCTATCCATTCAGGCACTGCTCAGTGCA
CCCAATCCCGACGATCCGCTGGCCAACGATGTGGCTGAGTTGTGGAAGGT
CAACGAGGCGGAGGCCATTCGCAATGCCCGCGAGTGGACCCAGAAATATG
CCGTCGAAGACGCAAGCTTTCTAGACCAT
FMO01678.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ben-RE | 1810 | CG18319-RE | 166..618 | 9..461 | 2265 | 100 | Plus |
| ben-RD | 1852 | CG18319-RD | 208..660 | 9..461 | 2265 | 100 | Plus |
| ben-RB | 852 | CG18319-RB | 246..698 | 9..461 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13998161..13998613 | 9..461 | 2265 | 100 | Plus |
| 2L | 23513712 | 2L | 14563181..14563558 | 407..30 | 435 | 74.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:48:03 has no hits.
FMO01678.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:26 Download gff for
FMO01678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18319-RA | 227..693 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:37 Download gff for
FMO01678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ben-RB | 236..702 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:18 Download gff for
FMO01678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ben-RB | 236..702 | 1..465 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:18 Download gff for
FMO01678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13998151..13998617 | 1..465 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:37 Download gff for
FMO01678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13892184..13892650 | 1..465 | 98 | | Plus |
