FMO01679.5prime Sequence
1204 bp (1047 high quality bases) assembled on 2008-04-11
> FMO01679.5prime
CAGTCGACATGACAAAGATGGGCGGAAATTTGGCAGTGATGCTGCTGTCG
CTGTTTTTGAGTGCGTTAGCCACGGGCAACGGCAACTCCATACCGACGAC
CACGACGCCCCAGGGCGTATTCGAAACCCGTACGGACAAGCTGCCCGGTG
GCGCTGCCAGCGTGCCCAGTGGAGCGGGTATCTACGACGATATAGATACC
TTTGTGCCCTTCCGGAGCGACTCGCACGATCCGTTCTCATGGCATCTACT
GAAGACGGTGCTGCAGAACGAGACAGCCGACAAGAATGTGATCATCTCGC
CGTTCTCCGTCAAACTGGTGCTGGCCCTGCTGGCTGAGGCGGCCGGAGCC
GGAACCCAGACGCAAGTGGAGCTGGCCAACACGCAAACAGACATTCGATC
GCAAAATAATGTGCGGGAGTTCTACCGCAAGACACTTAATTCCTTCAAGA
AGGAGAACCAGCTCCACGAGACGCTCAGTGTGCGCACCAAGCTCTTCACG
GACAGCTTCATCGAGACACAGCAGAAGTTCACGGCCACGCTGAAACACTT
CTACGACAGCGAGGTGGAGGCGCTAGACTTCACCAATCCCGAGGCGGCGG
CAGATGCCATCAACGCCTGGGCCGCCAACATCACGCAGGGCAGACTTCAG
CAGCTAGTAGCCCCGGACAACGTGCGCAGCAGCGTAATGTTGCTGACCAA
TCTGATCTACTTCAACGGTCTGTGGCGGCGGCAGTTTGCCACCACATTCC
AGGGATCCTTCTTCCGCAGCAAGGACGACCAGTCGCGGGCGGAGTTCATG
GAGCAGACCGACTACTTCTACTACACCACCTCGGAGAAGCTGAAGGCGCA
GATTCTGCGTCTGCCCTACAAGGGCAAGAACTCCCTGTTCGTCCTGCTGC
CCTACGCCCTGAATGGCATCCATGACTTGGTCAGAACCTGAAACGACGAG
CTAAAGAGCGCTCAGTGGCCATGGAGGAGTGAAAGGTGAAGTGACGCTGC
TCAGTTCCATTTCGACTACAGCAGAACCTTAAGGGAACGTTGCGCAGCTG
GGTGTGGGCGAAATCTTTGAGGACGCGCCCTCGCTGCGGATACCCGCGGG
CGCTGAGTTCGCCGCAAGTTAGGGGTCTAACTCTGCAGGCGACATTAAGG
GAGCGAAGGTACGGGAGCTACACGACCACGCGTTTGTGTGGGAGATTGCT
AAAC
FMO01679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spn27A-RB | 2283 | CG11331-RB | 173..1289 | 9..1114 | 5115 | 97.9 | Plus |
Spn27A-RA | 1569 | CG11331-RA | 173..1289 | 9..1114 | 5115 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6672089..6673175 | 1087..9 | 4890 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:52 has no hits.
FMO01679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:27 Download gff for
FMO01679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11331-RA | 165..1256 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:09 Download gff for
FMO01679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn27A-RA | 168..1259 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:47 Download gff for
FMO01679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn27A-RA | 168..1259 | 1..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:47 Download gff for
FMO01679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6672089..6673180 | 1..1087 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:09 Download gff for
FMO01679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6672089..6673180 | 1..1087 | 98 | | Minus |