FMO01685.5prime Sequence
958 bp (958 high quality bases) assembled on 2008-04-11
> FMO01685.5prime
CAGTCGACATGACCAATCTGGCTCCCACCATCCGGCTGAACAACGGGCGC
GAGATGCCAACTCTGGGCCTTGGCACCTGGAAGTCGTTCGAGTCGGACGC
CTACCACTCAACGCGCCACGCCCTCGACGTGGGCTACCGGCACCTGGACA
CCGCCTTCGTCTACGAGAACGAGGCTGAGGTGGGCCAGGCGATCTCCGAG
AAGATCGCCGAGGGAGTGGTCACACGCGAGGAGGTTTTCGTGACCACCAA
GCTAGGCGGAATCCACCACGACCCTGCATTGGTGGAGCGCGCCTGCCGCC
TGAGCCTTAGCAACCTGGGTTTGGAATACGTAGACCTCTACCTGATGCAC
ATGCCGGTGGGCCAGAAGTTCCACAATGACAGCAACGTGCACGGAACCCT
GGAGCTGACGGACGTGGACTATCTGGACACCTGGCGCGAGATGGAGAAGC
TGGTGGATCTGGGCCTGACGCGCAGCATCGGCCTGTCCAACTTCAACGCC
GCGCAGACGGAGCGAGTGCTAGCCAACTGCCGCATCCGGCCGGTAGTGAA
CCAGGTGGAGTGCCACCCAGGCTTTCAGCAGCGCCAGCTCCGGGAGCATG
CCAAGCGCCACGGACTGGTCATCTGCGCCTACTGCCCCCTGGCACGTCCC
CAGCCCGCTCGGCAGTGGCCGCCCTTCCTCTACGACGAGCATGCCCAGAA
TCTGGCCAAGAAGTACGGCCGCACCACGGCACAGATCTGCCTGCGTTATC
TGGTCCAGCTAGGCGTGGTGCCACTGCCCAAGTCGTCGAACAAGGCCCGC
ATCGAGGAGAACTTCCGCGTCTTCGACTTCGAGCTGAGTCCAGACGACGT
CGCCGGCATGGAGCAGTATCACACCGGGCAGCGCACGGTACTCTTTTCGG
GAATGTCGGGCCATAAGTACTACCCGTTCAACGACGAGTTCGCAGCTTTC
TAGACCAT
FMO01685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9436-RA | 1303 | CG9436-RA | 133..1065 | 9..941 | 4650 | 99.9 | Plus |
| CG10863-RA | 1089 | CG10863-RA | 466..537 | 426..497 | 210 | 86.1 | Plus |
| CG12766-RA | 1075 | CG12766-RA | 152..289 | 116..253 | 180 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6757839..6758771 | 941..9 | 4650 | 99.9 | Minus |
| 3L | 28110227 | 3L | 3941683..3941754 | 497..426 | 210 | 86.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:37:23 has no hits.
FMO01685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:35 Download gff for
FMO01685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9436-RA | 106..1051 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:13 Download gff for
FMO01685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9436-RA | 123..1068 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:26 Download gff for
FMO01685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9436-RA | 123..1068 | 1..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:26 Download gff for
FMO01685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6757836..6758778 | 1..945 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:13 Download gff for
FMO01685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2645341..2646283 | 1..945 | 99 | | Minus |
