FMO01686.5prime Sequence
1202 bp (973 high quality bases) assembled on 2008-04-11
> FMO01686.5prime
CAGTCGACATGCCGGACGCAGTGCAGCAGAGTTTCGTGCGTAGCTTCATT
GACTACCTGAAGAAGCAGGGGGACGTGATGTCGCCGGACCAGACCGAAAG
CATCGAGGTGGCGATCCAGTGCCTGCAGGCGGCCTTTGACTTGGGCGATG
ATGTGGAGGCAGCGCCGGCTGCGGCTGGTGAGGAGCAGGCCACCACACAG
AGCAGCAGCACTGCGAGCGCACCGGACGATGATGCGGTGGCCAGCGGAAG
TGCTGGTATCGGCGCCGCCGCCGCCGCCGTTCCCAATAACATTGACATGT
TCGAGCTCTTCCAGTCGCTGTATACAGAACGCAATCCGGAATCCCTGGCC
CTGGCCGAATCCATCAAGAACGAGGGCAACCGGCTGATGAAGGAGAACAA
GTACAATGAAGCACTGCTGCAGTACAATCGTGCCATCGCCTTCGATCCCA
AGAATCCGATCTTCTACTGCAATCGGGCTGCGGCCCACATCCGGCTGGGT
GAGAACGAACGCGCCGTAACCGATTGCAAGTCCGCCCTGGTGTACAACAA
CAACTACAGCAAGGCGTACTGCCGCCTGGGCGTGGCGTACTCCAACATGG
GCAATTTCGAGAAGGCGGAACAGGCCTACGCCAAGGCCATCGAGCTGGAA
CCGGACAACGAGGTGTACAAGAGCAACCTGGAAGCGGCCAGAAACGCCAG
GAACCAGCCGCCCCAAAACGGGGCGATTAAGGGAAGACCTAATCACATGC
TGTCCCAGCCAATGGTTAGGAATTTGTTCAACAACGCCGAGATCGACGTG
GAGCAGCTGCTGTCGATGCTTCAGAATCCAATGATCATGAACACCATTCG
CCAGCAGTTCGGCGGCGCAATGCCCCGACCCTGCCCAATGACATGGTGCA
AATGATCTATACATGACCAGCCAATTGACTGGCTTCCCAATTCGAACGCA
AATCCTGGCAATGAACAGCAGCCGTGCAATCAGGCTCCCACGAGCACGCA
GCTTTCTAGACCATTCGTTGGCGCGGCGGGCCTCAGGTAGTGGTTCATAA
TATAATCATAATTCATAATCATATCCCAAGCTAGCTAGGAGATCCTGTGC
ATGAACTAGTGCCAGGATCTCACACAATAAAAAACGCCGCGTCAACGGAC
GTCTGACAAATTCGTATGAAGCTGAGGTCTTATCGTACCTATCACACAGT
GA
FMO01686.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgt-RB | 1463 | CG5094-RB | 278..1269 | 9..997 | 4765 | 99 | Plus |
| Sgt-RA | 1284 | CG5094-RA | 99..1090 | 9..997 | 4765 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17473588..17474579 | 9..997 | 4640 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:33 has no hits.
FMO01686.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:25:14 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:21 Download gff for
FMO01686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgt-RA | 99..1090 | 9..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:31 Download gff for
FMO01686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgt-RA | 99..1090 | 9..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:31 Download gff for
FMO01686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17473588..17474585 | 9..1001 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:21 Download gff for
FMO01686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17473588..17474585 | 9..1001 | 98 | -> | Plus |
