FMO01687.5prime Sequence
1197 bp (1008 high quality bases) assembled on 2008-04-11
> FMO01687.5prime
CAGTCGACATGCGTGATGAGATTTTGGACCCCAGTAACCTAGTGAAGAAC
CGGGAGATACTCTACCGACTGATGATCAGCCAGCTGATGTACGACGGCCT
GGAGAAGTTCGCCATGGAGCTGTCCATGCTGGTGAAGGCGGACCAGTGCG
CTCCCAGTGAACGCCTGCTGCACGTAATGATTGCAGGGATGCAGACGCTG
AGCGACAAGGACAAAACCAACTCGGATGATGTGCTGCCCGGCATAGACTT
GGAATTCGAGCCGGAGGCTTCGGCCTTGGCCCCGGAACCACATTCCTACG
AAACCGCGTATGTGACCTCGCACAAGCAGGCCTGTCGCGCCGGCGCCTTC
AGTTGCGATGGTTCCCTGGTGGCCACCGGGAGCGTGGATGCCAGCATCAA
GATTCTGGACGTGGAGCGGATGCTGGCGAAGTCTGCGCCCGAAGATATCG
AGCCGGGCAGGGAACAACAAGGCCATCCAGTGATTCGCACGCTCTATGAT
CACACTGATGAAGTGTCTTACCTGGAGTTCCATCCCAAGGAGCACATCCT
GGCCTCCGCCTCGCGCGATGGCACTGTTAAGTTGTTTGACATTGCCAAGC
CTTCGGTAAAGAAGGCCCACAAGGTGTTCACCGACTGCGAGCCGGTGCTG
TGCCTGTCTTTTCATCCTACTGGTGACTACGTAGCCATCGGAACGGAACA
TAACGTCTTGCGGGTCTACGATGTGGCCACCACCCAATGCTTCGTGAGTG
CCATTCCCTCGCAGCAGCACAAGGCTGGAGTTACTTGCGTGAAATATTCG
CCCACGGGGAAACTCTACGCCACAGGCAGCTATGATGGTGACATCAAAAA
TATGGGATGGGATCAGCGGGCGGTGCATCAACACCATTGCCGAGCGCATG
GCGGAGCGGCAATATGCTCACTGGAGTTTACGCGGAATGGAAAGTACCTC
CTATCTTCCGGTATGATTCACTGTTTATCTGGTGGGAGCTGTGTACCAGT
CGTCCATTCAGAACGTACACGTCGCTGGACCACGGCAGCAGAGCACCAGA
CAAAGCTGTATTCACCCACCAGAGGATACGTGCTTTCCGACAAGCACCAT
TCCATTGCTCGTGAACTCCGTAACGGCTTGCCCTTGACCTTAACTCGCAT
GGACACACGAACCTGTCCATATATTAGCATTCTGCCAAAGTTCTGCT
FMO01687.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CstF-50-RA | 1407 | CG2261-RA | 83..1279 | 8..1182 | 5150 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31735945..31736881 | 944..8 | 4590 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:41:25 has no hits.
FMO01687.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:39 Download gff for
FMO01687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2261-RA | 55..1258 | 1..1182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:48 Download gff for
FMO01687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-50-RA | 76..1279 | 1..1182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:05 Download gff for
FMO01687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-50-RA | 76..1279 | 1..1182 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:05 Download gff for
FMO01687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31735945..31736884 | 1..944 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:48 Download gff for
FMO01687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27561667..27562606 | 1..944 | 99 | | Minus |
