FMO01691.5prime Sequence
858 bp (771 high quality bases) assembled on 2008-04-11
> FMO01691.5prime
AAAACCAAACTATCAGTCGACATGCGCAGCCTCAGCCGCTTTCGACTCAT
AACCTTCGATGTGACCAACACTCTGCTCCAATTCCGAACCACTCCCGGCA
AGCAGTACGGCGAGATTGGAGCCCTGTTCGGAGCCCGATGCGACAACAAC
GAGCTGGCCAAGAACTTCAAGGCCAACTGGTACAAGATGAACCGCGATTA
TCCCAACTTTGGGCGCGACACGAATCCCCAGATGGAATGGCAGCAATGGT
GGCGTAAGCTGATAGCAGGAACTTTTGCGGAGAGTGGAGCGGCCATTCCC
GACGAGAAGCTGCACAACTTCTCCAACCACCTAATTGAGCTATACAAAAC
CTCCATTTGCTGGCAGCCATGCAACGGCAGCGTGGAACTCCTTCAGCAGC
TCCGCAAGGAGTTGAAGCCGGAGAAGTGCAAGCTGGGTGTGATAGCCAAC
TTCGATCCTCGGCTGCCGACTCTGCTGCAGAACACCAAGCTGGATCAGTA
CCTGGACTTTGCAATTAACTCGTACGAGGTGCAGGCCGAGAAGCCCGACC
CCCAAATCTTTCAAAAGGCAATGGAGAAGTCGGGTCTGAAGAACCTCAAG
CCGGAGGAGTGCCTTCACATTGGGGGATGGTCCCACCACTGATTATCTGG
CCCGCCAAGGAAACTGGGCTGGCACTCGGCGCTGGTGCACGAGAAGAGCT
GACGCATATCTGGTCAAGAAATACCGGCGAGGACATCGATCGAGATCATG
TCTTCCCCAGTCTCTACGACTTCCACAAAAAGATCTCCCACGGCGCAGTT
GTTTGGCAAGCTTTTCTAAACATTTCGTTTTGGCGCGCGGGCTCAGGTAA
GTGGCCAT
FMO01691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Reg-2-RA | 883 | CG3200-RA | 70..849 | 22..806 | 3755 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 605199..605735 | 806..265 | 2430 | 98.7 | Minus |
| 3L | 28110227 | 3L | 606340..606500 | 182..22 | 790 | 99.4 | Minus |
| 3L | 28110227 | 3L | 606196..606286 | 269..179 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:58:05 has no hits.
FMO01691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:25:18 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:22 Download gff for
FMO01691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Reg-2-RA | 61..854 | 13..813 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:27 Download gff for
FMO01691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Reg-2-RA | 61..854 | 13..813 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:27 Download gff for
FMO01691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 605200..605731 | 269..805 | 98 | <- | Minus |
| 3L | 606197..606285 | 180..268 | 100 | <- | Minus |
| 3L | 606343..606509 | 13..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:22 Download gff for
FMO01691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 605200..605731 | 269..805 | 98 | <- | Minus |
| arm_3L | 606197..606285 | 180..268 | 100 | <- | Minus |
| arm_3L | 606343..606509 | 13..179 | 97 | | Minus |
