FMO01693.5prime Sequence
482 bp (482 high quality bases) assembled on 2008-04-11
> FMO01693.5prime
CAGTCGACATGGGCGTGTTGGACAATATTGCGTTGCATTTCACGGGGGAT
GCGTCCAGGAACAGGAACACCTCCATAATAGCCGGACTTCTGTTTTTCGC
AGGATGGTGGGTTCTAATCGATGCCATGTCCATCGACGGCAAGCACCAGA
TTACCACAGGACACGTCTTCATCGGCATCTTCGGGACCATCAGCTTCTGC
ATGGTGAACGCAGTGAAGGGAGAACATATTTCTGATGAGAACTCATCGGA
GTCCGGCGCCAGGATAGCGAAGATCTGGCTGCTTGTGGGCTTCCTAATGG
GTTTTGCCTCCATCATTGCCGCCATCTGGGTGATGATCGACGACTTCATC
AACAATGAAAAGAAGGATGGCTGGTTTGGCGTGGCTCTGCTGATGCAAAA
CGTCTTCATCCTGTTCGCCAGTTTGGTCTACAAGTTTGGACGCAACGAGG
AAGAGTGGAATGAGGCAAGCTTTCTAGACCAT
FMO01693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15012-RC | 858 | CG15012-RC | 94..557 | 9..472 | 2290 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4291875..4292010 | 227..92 | 680 | 100 | Minus |
| 3L | 28110227 | 3L | 4291687..4291816 | 357..228 | 650 | 100 | Minus |
| 3L | 28110227 | 3L | 4291509..4291624 | 472..357 | 550 | 98.3 | Minus |
| 3L | 28110227 | 3L | 4292070..4292153 | 92..9 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:44 has no hits.
FMO01693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:47 Download gff for
FMO01693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-RB | 237..700 | 9..472 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:31 Download gff for
FMO01693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-RC | 94..557 | 9..472 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:10 Download gff for
FMO01693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-RC | 94..557 | 9..472 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:10 Download gff for
FMO01693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4291687..4291816 | 228..357 | 100 | <- | Minus |
| 3L | 4291875..4292009 | 93..227 | 100 | <- | Minus |
| 3L | 4292070..4292153 | 9..92 | 100 | | Minus |
| 3L | 4291509..4291623 | 358..472 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:31 Download gff for
FMO01693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4291509..4291623 | 358..472 | 98 | <- | Minus |
| arm_3L | 4291687..4291816 | 228..357 | 100 | <- | Minus |
| arm_3L | 4291875..4292009 | 93..227 | 100 | <- | Minus |
| arm_3L | 4292070..4292153 | 9..92 | 100 | | Minus |
