FMO01695.5prime Sequence
884 bp (884 high quality bases) assembled on 2008-04-11
> FMO01695.5prime
CAGTCGACATGACGCTCGAACAGCTGTCCGCAAATAAGTGCTTCGAGGGC
GAGCAACGCGTGTATCGCCATCGCTCGGACACCTTGAAGTGCGACATGAC
CTTTGGCGTCTTCCTGCCGCCGGCCGCTTTGGAGGGTAAACCGTGTCCGG
TGCTGTTCTTCCTCAGCGGACTGACCTGCACGCATGAGAACTTCATCCAG
AAGAGCGGATTCCAGCAGCACGCCGCCCGCCACAACCTGATCGTCGTCAA
TCCGGACACTTCGCCCAGGGGCGTGGAAATTGCCGGCCAAGATGATGCAT
ACGACTTTGGAAGCGGGGCTGGATTCTATGTGGATGCAAAGGAGGAGCCG
TGGTCGAAGCACTACAAGATGTACAGCTATGTGACCCAGGAGCTGGTGGA
TGTGGTCAATGCCAATCTGCCCGTGGTTCCCGGTAAACGCGGTATATTCG
GCCACAGTATGGGCGGCCACGGAGCCCTGATCTGCGCGCTTAAGAATCCC
GGGCTGTACCAGTCGGTGTCCGCTTTTGCGCCGATTGCCAATCCCACCGA
GTGCCCGTGGGGCAAGAAGGCCTTTGCCGGCTATCTGGGCTCCAATCCGG
ATGACTGGGCCCTGTGGGATGCCACGCATCTGGTGTCGCAGTACGAGAGC
ACTCCGCAGGAGCTCTTCATCGACCAAGGTGCAGCAGACAACTTCCTGGC
CGGCAAGCAGCTGCTGCCGGAGAACCTGCTGGCTGCCGCAGATGGCAATG
ATCACATCCAGACCATCTTCAAGCAGCGCGAGGGATACGATCACAGCTAC
TTCTACATCGCCACGTTCGTCGCCGAACACATCGCCTACCATGCCGCCCT
GCTCACAGCTTCCGCTGCAAGCTTTCTAGACCAT
FMO01695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4390-RA | 1006 | CG4390-RA | 51..910 | 7..866 | 4300 | 100 | Plus |
| CG4390-RB | 1141 | CG4390-RB | 186..1045 | 7..866 | 4300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20056514..20057373 | 866..7 | 4300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:48:09 has no hits.
FMO01695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:33 Download gff for
FMO01695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RA | 72..935 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:41 Download gff for
FMO01695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RB | 195..1060 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:21 Download gff for
FMO01695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RB | 180..1045 | 1..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:21 Download gff for
FMO01695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20056514..20057377 | 1..866 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:41 Download gff for
FMO01695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15882236..15883099 | 1..866 | 99 | | Minus |
