FMO01696.5prime Sequence
1196 bp (1009 high quality bases) assembled on 2008-04-11
> FMO01696.5prime
AAAAAACGAAGTTATCAGTCGACATGAAGAAAAAGCAGGTGGAAAGTGCA
TCCGAGGAGGAGGAAGTGCAGTCCGAAAACTCCGAGGCTTCCGACGAGGA
GGAGCTACAGGCAGAGGACTCCGACGAGGACCAGCTGCAGGCGGACGACT
CCGAAGACGAAGATTCCGATGGATCCGAACTGGATCTGGACGCCAGTGAC
ACCGAATCCGATGAAGATGATGGTGAGGAGGAAGATACAATCAAACCGCA
GCCCAAAAGCCGTGCCGAGATTATCGACGAGAAGATCCACACCAAGTACG
AGCAGTTAAAGGGCACCCGGCTGTATGTCCGGTTTCCCCAAAAACTGCCC
CTGGACTTGGATGAATTCAATGCCAAGGTGAAGGCTCTGCATCCACTGGT
TCTGAAGTCCACAAAGCCTCGCCAGAAGCATGCACGTTTCTGCCTCGTCG
ATTTCAAGTCGAAGGAAGATCGCGATCAAGCCTTTAAGGATATCAAGGCT
TCGATCGAAAAGGATGACAAGCACAAGGGCTTATTCGTATCACTGCCTAA
GACGGATTCCGATGATTTTGTCAACGAGCTGGTGACCCGCAAGCAGACAT
CCATCGTAAACAAACGTACCAAGGCCCTGATGAAGCGTGCTACTAAGAAG
GTCCTCACCAAGGGTAACTTCACCTCGTCCGTGGTCATTACCAATCTGCC
AAAGACCAGTTCGTTGCCCCAGGTGCGCCAGCTGTTCCACGACCAGGCAG
TGGACATTCAAATACGACCGGGCAAGGGTAAATTCCGGGACTACAGCACG
GCGACCGTAACCCTGCCAACGACCCACGATGCACGCAAGGCCATCAAGGA
GAAGCTCAGCCTGGCTGGCACGCCACTTATATTGCGCTTCAACACTCAGA
ACAAGCGGAGCTTTAAAAATAAGCTCAAGCGAAAGGCCGAGAAAGGAAAT
CCTCAGAGAAGGATCCACTGAGTACGAAACAAACGATAAGAGGTCCAAGT
CGGAAAAGGAGAGCACTTAATTTAGAAACCAGAGTTAATACTAAGCACCA
GCGAGGAAACCTTAGAGAAAGTCGCTCAGGACAAACCTTATATTAAGACA
CCAGGAGTAAGGAACCTAACCGCGAAGCTAGCCTTTCTAGACATTCGTTT
GGGCGCGCGGCCAGGTAATGGTCATATACTTAATTCTATATCATGA
FMO01696.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18178-RB | 1278 | CG18178-RB | 79..1198 | 22..1123 | 4995 | 97.2 | Plus |
| CG18178-RA | 1310 | CG18178-RA | 111..1230 | 22..1123 | 4995 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9717998..9718985 | 1007..22 | 4780 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:48:12 has no hits.
FMO01696.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:52:34 Download gff for
FMO01696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-RA | 108..1210 | 22..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:43 Download gff for
FMO01696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-RA | 111..1213 | 22..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:23 Download gff for
FMO01696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-RA | 111..1213 | 22..1111 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:23 Download gff for
FMO01696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9717883..9718985 | 22..1111 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:43 Download gff for
FMO01696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9710983..9712085 | 22..1111 | 97 | | Minus |
