FMO01704.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-04-17
> FMO01704.5prime
ATAAAACAAAGTTATCAGTCGACATGGACCTGAAACAGCGCACATATCTC
CTGGTGACCGGTGCATCACGTGGAATTGGCCGTGAGTTCGCCCAGCAGTT
AGCCAAACGGATCAAAGCCGAGGGTTCCATGGTGACGCTTCTGGGACGCA
ATCAAACCCTTTTGCAGGAGTCTAAGGCAGAGATTGTCGCCACAGTGCCA
GATCTATCCGTGCAAACCTATTCGCTGGAGCTGGAAACGGCCAAAACGGA
GGACTTTACCAAGATTCTGGAGGCATCCGGTGGAAAGAACAATTTCGAGC
GAGCCATAGTCATTCATAATGCCGGCACAGTGGGCGATACGTCAAAGAGG
GCCAAAGAAATCGGAGATACCGACTTCCTACAGCGCTACTACCACTCCAA
TGTCTTCTCGGCCATTTCGCTAAACTGCGAGTTTATGCGCGTCTTCAAGG
GAATCCCAAAGTTGGTGGTTAATCTCAGCACCTTGGCAGCCATTGCACCT
ATATCCTCGATGGCACACTATTGCACGGTGAAGGCAGCCCGTGAGATGTA
CTTCCGAGTGCTGGCCACCGAGGAGTCCGCCGAGGACACCCTGGTGTTGA
ACTACGCGCCCGGCGTCATAGACACACAGATGACCGTCCAGGTTCAGCGA
GAGGCCCACGATCCCGCCGTGGTCGCCATGTTTCGAGAGCAAAGGGAGTC
CAAGACCATGCTGACTCCCGCCCAAACGACGGAGCGATTCATCAAAGTCC
TGGAAGCATTCAAGTTCAAGTCCGGCGATCATGTGGATTACAGGGATGAG
CAGTTCGCAAGCTTTCTAGACCAT
FMO01704.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sptr-RA | 1143 | CG12117-RA | 132..915 | 23..806 | 3920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8463524..8464307 | 806..23 | 3920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:54:46 has no hits.
FMO01704.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:55 Download gff for
FMO01704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12117-RA | 682..1479 | 15..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:21 Download gff for
FMO01704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 123..920 | 15..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:50 Download gff for
FMO01704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 123..920 | 15..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:50 Download gff for
FMO01704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8463519..8464316 | 15..813 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:21 Download gff for
FMO01704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8357552..8358349 | 15..813 | 99 | | Minus |
