FMO01707.5prime Sequence
818 bp (818 high quality bases) assembled on 2008-04-17
> FMO01707.5prime
AAACCCAACTTATCAGTCGACATGGATACCCTGCTGATCGCCATTCTGGC
CATCGGACTGCTCCACAGAGATGCGCTATGCTATCCCACGAGGGATGAGT
CCGAGGACAAGATTATAGTCCTTCAGAACGAGGAGATGGAGCCCACGATC
CTGGACTGCGACTACGAGGTGGAGGAGAGCCCGAAGTTCATCACCGTCAA
ATGGTACAGAGACGACAAGTCCATATACCAGTGGATCTTCGGAACACCTC
CATATGCCATCCCCGAGTTCAGGAACGAGATTGACAGCACCTATGAGAGC
TCCACGGAGCCGAGCAAGCAGTACAGCTCGCTGGCTTTGATCAACCCCAC
GATCGCCACCACCGGCGACTACAAGTGCGTGGTGCAGACCTCGCTGAACA
CCTTCTCCAGCCACCAGAGGGTTCAGGTCATAGACCTGAGGAACTACACC
CTGGAGCTGTCCCACAAGACGATCCACAATGAGACGCAGCTGAACTGCAC
CGTGACGAACGTGTATCCCAGGCCCACCATCACGATAATATCCAACGACA
TGGACGTGGTGAAGCGGGAGCCCATGGTGTACGAGAACGAGGAGGGATAC
TTCGATGGCAGCGCCGTGGTGGCGGCCTACGACACCGACGACGATCCCGA
TGCCTAGAAGTGCGTGGTGTCCTTCGAGGGATACGGCAAGAACCTGACCA
CGGTGGCCACGTCCGCGGCGGCGGGCAGGAGCCACGTCACTTCAGCCTGT
GGCTGTTTTGTTTTCTGTACTACCTGCTCTGCAAGCTGAAGGTATTGGCC
GCAAGCTTTCTAGACCAT
FMO01707.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5597-RA | 920 | CG5597-RA | 106..885 | 22..800 | 3845 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23888125..23888402 | 262..539 | 1390 | 100 | Plus |
| 2R | 25286936 | 2R | 23888481..23888742 | 540..800 | 1230 | 98.9 | Plus |
| 2R | 25286936 | 2R | 23887872..23888064 | 69..261 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 23887078..23887126 | 22..70 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:33:23 has no hits.
FMO01707.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:00 Download gff for
FMO01707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5597-RA | 101..887 | 18..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:28 Download gff for
FMO01707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5597-RA | 102..888 | 18..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:50 Download gff for
FMO01707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5597-RA | 102..888 | 18..804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:50 Download gff for
FMO01707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23887074..23887126 | 18..70 | 96 | -> | Plus |
| 2R | 23887874..23888064 | 71..261 | 100 | -> | Plus |
| 2R | 23888125..23888402 | 262..539 | 100 | -> | Plus |
| 2R | 23888481..23888745 | 540..804 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:28 Download gff for
FMO01707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19774597..19774649 | 18..70 | 96 | -> | Plus |
| arm_2R | 19775397..19775587 | 71..261 | 100 | -> | Plus |
| arm_2R | 19775648..19775925 | 262..539 | 100 | -> | Plus |
| arm_2R | 19776004..19776268 | 540..804 | 98 | | Plus |
