FMO01709.5prime Sequence
615 bp (615 high quality bases) assembled on 2008-04-17
> FMO01709.5prime
TATAAAACAAAGTTATCAATCGACATGAACGCATTGCGCAACATCTTCAC
ATCGCGAACTCTCAACTATTTGCGCCAGAATGGACAAAACGCGATCCTCA
ACGCCACCCAGCAGCAACAAGCGGTGGACGCCGTGCCGCTAACCAACGAT
GCCGAGCAGCACCTAAAATCGTCGCGTCCAGCACCGCTTTCCATACCGCG
CTCCATACTCGATGCGTGCCATTTCACGGCCAAGCAGTTTGACCTGGGAG
GCTCCACGTCCGGAAACCAGGCGAATGGCTCTCTGTCGCCGACGACACTG
AAGCGCTTCCGACGCATGCAACGCCGCATGGAGCTGGTGTACCGCTGCAA
GCTGTGCAACACCCGCAACACGAAGACCATCAGCGAAGAGGCCTACTACA
GCGGCGTGGTGATCCTACAGTGCGACGGCTGTGCCGTCGACCATCTGATC
AAGGACAATCTGGGACTGTTCACCGGCAGCGATGGCGATAGCAGCATTAG
CTCTGGAATCAGTACCAGCAAGAATATCGACCAGGTGCTGGCCGACCGGC
ATGCCCGCGTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTGCA
AGCTTTCTAGACCAT
FMO01709.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-RB | 1188 | CG8206-RB | 174..746 | 25..597 | 2865 | 100 | Plus |
CG8206-RA | 1013 | CG8206-RA | 174..746 | 25..597 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15739403..15739975 | 25..597 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:07:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 163..208 | 113 | 71.7 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 163..208 | 113 | 71.7 | Plus |
FMO01709.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:04 Download gff for
FMO01709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 153..730 | 19..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:56 Download gff for
FMO01709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 169..746 | 19..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:51 Download gff for
FMO01709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 169..746 | 19..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:51 Download gff for
FMO01709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15739403..15739975 | 25..597 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:56 Download gff for
FMO01709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15633436..15634008 | 25..597 | 100 | | Plus |