FMO01724.5prime Sequence
521 bp (521 high quality bases) assembled on 2008-04-17
> FMO01724.5prime
AAAAAACAAAGTTATCAGTCGACATGCCTCCTGCATCCAATACGATCGTG
CTGAAGAGCCTCTCCGTGCTGCTGGGCCTCTTCTTCATCTTCGTGGGCAC
CCTCAAGCTGACGCCGCACATTAGCAAGGATCTCTACAAGGACCTGCGCA
CAGAGTACGTGAAGTATGCCAAAGTGTTCCCACTAACGGCGCTCTTCGGA
GTGAAGATACCCTCGAAATGGTACCGCCGCACCGTTGGCATCCTGGAGAT
CGTCTGCGGCCTGGCCATGGCGCTGATTCCCTATCATAAGGTCAAAAACA
CGGCCAACGTTACGCTGCTGGTGTTGATGCTCCTGGGCATCTACCAGCAC
TGGATGGTCAGTGATCCGTTCGAGCGCTCCGGTCCGGCGCTGGTCTTCAC
CTTCATGCTGGGCGGACGCCTGGTGGTCTGGTACCAGACCGCCCGCCTCC
AGGACGAGGCCACGACGGCAGCGCAGCCTGCTGCGAACGGCGTAAAGCAG
GACGCAAGCTTTCTAGACCAT
FMO01724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13920-RC | 1292 | CG13920-RC | 442..921 | 24..503 | 2400 | 100 | Plus |
| CG13920-RA | 1156 | CG13920-RA | 306..785 | 24..503 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1650913..1651130 | 286..503 | 1090 | 100 | Plus |
| 3L | 28110227 | 3L | 1650713..1650857 | 146..290 | 710 | 99.3 | Plus |
| 3L | 28110227 | 3L | 1649385..1649507 | 24..146 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:16 has no hits.
FMO01724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:06 Download gff for
FMO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13920-RA | 443..922 | 24..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:06 Download gff for
FMO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13920-RA | 380..859 | 24..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:34 Download gff for
FMO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13920-RA | 306..785 | 24..503 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:34 Download gff for
FMO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1650714..1650852 | 147..285 | 100 | -> | Plus |
| 3L | 1650913..1651130 | 286..503 | 100 | | Plus |
| 3L | 1649385..1649507 | 24..146 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:06 Download gff for
FMO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1649385..1649507 | 24..146 | 100 | -> | Plus |
| arm_3L | 1650714..1650852 | 147..285 | 100 | -> | Plus |
| arm_3L | 1650913..1651130 | 286..503 | 100 | | Plus |
