FMO01725.5prime Sequence
855 bp (855 high quality bases) assembled on 2008-04-17
> FMO01725.5prime
CAGTCGACATGCCGTACGCCAACCAGCCGTCCGTGCAGATAACCGAGCTG
ACGGACGACAACGTAAAGTTCGTCCTGGAGGACACGGAACTGAGTGTGGC
CAACAGCCTGCGGCGAGTGTTCATCGCGGAGACGCCGACGCTGGCCATCG
ACTGGGTGCAACTGGAAGCCAACTCTACGGTGCTCTCGGATGAGTTTTTA
GCCCACCGGATCGGTCTGATACCGCTGATCTCCGACGACGTCGTGGAGCG
GCTGCAGTACACGCGTGACTGTATCTGCCTGGACTTCTGCCCCGAATGCA
GCGTGGAGTTCACCCTGGACGTAAAGTGCAGCGAGGAACAGACGCGCCAC
GTGACCACCGCCGATCTCAAGTCGAGCAATGCCAAGGTCCTGCCGGTGAC
GTCCCGCAACCAGGGTGAGGAGGACAACGAGTACGGCGAGAGCAACGATG
AGATCCTCATAATTAAGCTGCGCAAGGGGCAGGAGCTGAAGCTGCGCGCC
TACGCCAAGAAGGGATTTGGCAAGGAGCACGCCAAGTGGAATCCTACCGC
AGGCGTGTGCTTCGAGTATGATCCGGACAACTCCATGCGACACACTCTGT
ATCCCAAACCTGATGAGTGGCCAAAGAGCGAGCACACCGAACTGGAGGAC
GACCAGTACGAGGCGCCCTACAACTGGGAAGCCAAGCCAAACAAGTTCTT
CTTCAACGTCGAATCCGCCGGTGCCCTTAAGCCTGAGAACATTGTGGTCA
TGGGTGTGCAGGTGCTGAAGAACAAGCTGTCAAACCTGCAGACGCAACTC
AGCCACGAGTCCCAAAACGATGCATTGGGCCGTTGCAAGCTTTCTAGACC
ATTCG
FMO01725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpII33-RA | 970 | CG7885-RA | 88..912 | 9..834 | 4105 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13833424..13834243 | 9..828 | 4100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:49 has no hits.
FMO01725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:25 Download gff for
FMO01725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7885-RA | 81..910 | 1..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:20 Download gff for
FMO01725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpII33-RA | 83..912 | 1..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:12 Download gff for
FMO01725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpII33-RA | 83..912 | 1..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:12 Download gff for
FMO01725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13833419..13834245 | 1..831 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:20 Download gff for
FMO01725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13833419..13834245 | 1..831 | 99 | -> | Plus |
