FMO01732.5prime Sequence
776 bp (776 high quality bases) assembled on 2008-04-17
> FMO01732.5prime
ATAATACGAAGTTATCAGTCGACATGGACGCTGGCGTGTGGTACCGCTCG
CTGCCCCGCTTCACCCGCTACTGGCTGACGGCCACCGTGGTGTTGAGCAT
GCTCTGCCGCTTCGATGTGATACCCCTTCATTGGCTGCATCTGGACCGAT
CGGCCGTTTTCAGCAAGCTGCAGCTCTGGCGCTGCATGACGTCACTGTTC
GTCTTTCCCATCTCGTCGAACACGGCCTTCCACTTCCTCATCAACTGCTT
CTTCATCGTTCAGTACAGCTCCAAACTGGAGAAGGATCAGTACAGCCGAA
GTCCGGCTGATTACCTGTACCTGTTGATCGTGTCGGCGGTGCTGGCCAAC
ATCGGGGGCATGATCTTCAACGTGTACTTCCTCATGGACACGCTGGTGCT
GGCCATCACGTATATCTGGTGCCAGCTGAACAAGGACGTCACCGTGAGCT
TCTGGTTCGGCACCAGGTTCAAGGCCATGTACCTTCCCTGGGTGCTGGCC
GCCTTCGAGTTTATTTTCCACTTCTCGCTCGCCTCGCTGGTGGGCATATT
CGTGGGACATGTGTACTACTTCTTCAAGTTCCAATACTCGCAGGATTTGG
GCGGCACACCCCTGTTGGAAACGCCGCAGTTCTTGAAGCGCCTGGTGCCA
GATGTTTCCGGCGGATTCGGCGGCTTCGGACTCCCACCGGAGAGCAGAGC
ACCACCTAGGCAGGCGACCGAAAGTCCCTGGGGCCGGGGCATGACCTTGG
GTCGCAACGCAAGCTTTCTAGACCAT
FMO01732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Der-1-RB | 1243 | CG10908-RB | 280..1014 | 24..758 | 3675 | 100 | Plus |
| Der-1-RA | 1088 | CG10908-RA | 125..859 | 24..758 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1974561..1974818 | 266..523 | 1290 | 100 | Plus |
| 2L | 23513712 | 2L | 1974236..1974480 | 24..268 | 1225 | 100 | Plus |
| 2L | 23513712 | 2L | 1975061..1975184 | 635..758 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 1974881..1974992 | 524..635 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:58 has no hits.
FMO01732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:36 Download gff for
FMO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10908-RA | 86..832 | 16..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:18 Download gff for
FMO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Der-1-RA | 119..865 | 16..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:55 Download gff for
FMO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Der-1-RA | 119..865 | 16..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:55 Download gff for
FMO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1974564..1974818 | 269..523 | 100 | -> | Plus |
| 2L | 1974881..1974991 | 524..634 | 100 | -> | Plus |
| 2L | 1975061..1975190 | 635..765 | 97 | | Plus |
| 2L | 1974230..1974480 | 16..268 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:18 Download gff for
FMO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1974230..1974480 | 16..268 | 98 | -> | Plus |
| arm_2L | 1974564..1974818 | 269..523 | 100 | -> | Plus |
| arm_2L | 1974881..1974991 | 524..634 | 100 | -> | Plus |
| arm_2L | 1975061..1975190 | 635..765 | 97 | | Plus |
