FMO01733.5prime Sequence
1002 bp (1002 high quality bases) assembled on 2008-04-17
> FMO01733.5prime
ATAAAACGAAGTTATCAGTCGACATGGCTGCAGTTTCGGATATTCCAGTG
CACCTGCCCAAGCTGCTGGCTCTGTTCAAGACGGTGGTGCCCAAGCTGGT
GAACAACAAGCACAAGGGACAGTACGGACGCATTGGAGTGATCGGTGGGT
CCCTGGAGTACACCGGAGCGCCGTACTTCGCGGCCATTTCCTCGATAAGA
GTGGGCGCTGACCTGGCGCATGTGTTCTGCCATTCAAATGCGTCGGCCAT
TATCAAGTCCTACAGTCCCGATCTTATCGTGCATCCAGTGCTAGACTGTG
TGGATGCAGTGGAGAGAATAGCGCCCTGGTTAGAGCGACTTCACGTCGTT
GTTATTGGACCTGGACTGGGTCGGGAGCCGGGCATCCTGAAGACGGCATC
CAACGTACTCAAGCTGTGCATGGACACCAAGAAACCAGTTGTCATAGACG
CCGATGGACTGTTTCTGCTCAACGACAATCTGAATCTGATCTGTGGACAG
CCGAATGTCATACTCACGCCAAATGTCATGGAGTTCCAGAGACTGTTTGG
CGAGGATGACCAGGCGGCGCGCCAGAAAATGTCCCTCCTGGGAGCCGGAG
TAACTGTCCTGGAGAAGGGCGCCAACGACAAGATCTATCTCCCTCACTGC
AACGAAGTTCACTCAATGCCTAGCGGCGGTTCCGGTCGCAGGTGCGGTGG
ACAAGGTGACCTGCTCTCCGGATCTTTGGCCACCTTCTTCTCGTGGTCAC
TGCAGTCGGGTGAACCCAATCCCGCCCTGGTAGCTGCATGTGCCTCTAGT
TACTTTGTGAAAAAGTTAAACGCGGCTGCATTTCAAAAGTTTGGCCGCAG
CCTACTGGCCAGTGACATGGTCAATCAAATACCCAGCGTATTTCAGACCG
AGTTCGAAAACAGCGATCCTCAAGCAAGCTTTCTAGACCATTCGTTTGGC
GGGGCGGGCCCAGGTAGTGGTCATAATCATATCATAATCATATCATAATC
AC
FMO01733.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10424-RA | 1233 | CG10424-RA | 78..977 | 24..923 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19096655..19097227 | 923..351 | 2865 | 100 | Minus |
| 3L | 28110227 | 3L | 19097304..19097632 | 352..24 | 1645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:27 has no hits.
FMO01733.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:38 Download gff for
FMO01733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10424-RA | 75..980 | 18..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:00 Download gff for
FMO01733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10424-RA | 72..977 | 18..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:20 Download gff for
FMO01733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10424-RA | 72..977 | 18..923 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:20 Download gff for
FMO01733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19096655..19097227 | 351..923 | 100 | <- | Minus |
| 3L | 19097306..19097638 | 18..350 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:00 Download gff for
FMO01733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19090406..19090738 | 18..350 | 99 | | Minus |
| arm_3L | 19089755..19090327 | 351..923 | 100 | <- | Minus |
