FMO01742.5prime Sequence
761 bp (761 high quality bases) assembled on 2008-04-17
> FMO01742.5prime
ATAAAACGAAGTTATCAGTCGACATGCAGGACCCAAACGAAGATACCGAG
TGGAATGATGTGCTCCGAGCCAAGGGAATAATTGGGCCCAAGGCGAAGGA
GGCGGAGATCACAGAGGATCAGATCCAGAAGCTGATGGACGATGCCATCC
AGCGGCGCACAGATCTGCCACTGAATGAAGGCCAGCGCGACAAGAAGATC
GACGACATGTCGCTGGACGAACTCGACGAACTGGAGGATTCCGAGGACGA
GGCTGTTCTAGAGCAGTATCGCCAGCGACGCATCGCCGAGATGAGGGCCA
CCGCTGAAAAGGCGCGATTTGGATCAGTGCGCGAGATCTCAGGACAGGAT
TATGTCAACGAGGTAACCAAGGCCGGCGAGGGCATCTGGGTGGTACTCCA
CCTGTATGCCAACGGCGTACCGCTGTGCGCACTGATCCACCATCACATGC
AGCAGCTGGCCGTCCGCTTTCCACAGACCAAGTTCGTGCGCTCCGTTGCC
ACCACCTGCATACCAAACTTCCCCGAGAAGAACCTGCCCACCATCTTTAT
CTACCACGAGGGTGCGCTGCGCAAGCAGTACATAGGCCCACTGGAGCTGC
GCGGCGACAAGTTGACCGCTGAGGAGCTGGAGTTTATGCTGGGTCAGGCG
GGAGCAGTGCCCACCGAGATCACGGAGGATCCACGGCCGCAGATCAGGGA
CAAGATGCTTGCCGATCTCGAAGACAAAAGCTCGGACTTCTACGCAAGCT
TTCTAGACCAT
FMO01742.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| viaf-RA | 1158 | CG18593-RA | 134..855 | 22..743 | 3610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11992156..11992871 | 743..28 | 3580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:30 has no hits.
FMO01742.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:48 Download gff for
FMO01742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18593-RA | 126..855 | 14..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:31 Download gff for
FMO01742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 126..855 | 14..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:52 Download gff for
FMO01742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 126..855 | 14..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:52 Download gff for
FMO01742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11992156..11992876 | 21..743 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:31 Download gff for
FMO01742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11985256..11985976 | 21..743 | 99 | <- | Minus |
