FMO01744.5prime Sequence
1205 bp (1017 high quality bases) assembled on 2008-04-17
> FMO01744.5prime
CAGTCGACATGCGATCTCTGTGCTTCGTTTTGCTGTTCGTTTGGTTTTTC
TACCAAAACGAAGCTAAGTCTAAGGTTTCCTGTAAGGATGAAGCTGGAAA
CGATGTAGATTGGTGGCACCTTTACAAACTGCCCAAGCACTACCAGCACA
ACGATTTGGGCAAGGACACCAGTGGCTTGAAGTACCTGTACGTGACCAGC
CAGAACTATGACACCTGGCAGATGTCGGGAAAGTTCATTAGTGATCCCCT
ATCGCTGCCTGCCCAGACCCTTAACCCCTTGAACGACGATCCCAGCCACA
CTCTGCTGGCCGCCTACAACGATCAACAGCCGAATGGCACGGTTTTCAGC
AGCGGTGGTCATGCCAAAGGAGTGGTGGCCAGTGATGGGGAGACGGCTAT
TTGGATTGTCCACTCGGTGCCCAAATTTCCAACAATTCCGGACTACAGCT
ATCCCACATCCGGCGAGCAGTACGCACAGAGCATGCTCTGCGTCACACTG
AAGGGCGAGGATTTGGAGAAGGTTGGTCAGATTCTGGTGTACAATGAACC
GCACTTCTACTATCAACGCAACCCGCTGGCCACTCGCTCCGATGAGCTGT
TCCCGAGCCTGGAAAGGGCTCTGCATGGTCAGTGGCGGACGGAATCACCG
TTCCAGAAGGACTTGGAGGTGCGCAGCTTGGACGGCAAGAAGTTCCGGCT
GTTTGGCAAGAGTGGACGCGCCAATGTGGAGCTGTACGCCGATGTGGTCG
CACCCACTCTGGATGTCAGTCTTTTTGTGGAGGCGTGGCGCGACGGTGCC
GGCAACTTACCGAATAGCTGCGATAAGTCCGATAAGGTTCTCAATGTGGA
ATCCATTTCCAATCCGGAGCTATCGGTGGACTTTAGACCACACAAGATCA
CTCCAAGTGGGCGGTATCTCGTCCCACAGGCATTTTGATCTACCATTGGC
GAGTGGCGGCGGAGATGGATTTGTGTGGGCGACATCAACCGGCAGACTCA
GTTGCATCTGGTGGTGGACCGGTGCACAGAGCGCAAGGTATCATCTGTAC
CGCCACTGTCCCACTACGACAAGTGGCCCAACGAGCAGCTTTCTTAACAT
TCGTGGCGCCGGGCCAGGTAATGGCCAAATCCTAGCTAATCAAATCTATC
AACTAGCCTAAGAAATCCTGCATGACAGTAGGCTGATCTCTCACCAACTA
ACAAG
FMO01744.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNaseII-RA | 1228 | CG7780-RA | 39..1131 | 9..1082 | 4980 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18020075..18020960 | 112..994 | 4280 | 99.7 | Plus |
3R | 32079331 | 3R | 18019413..18019518 | 9..114 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:39 has no hits.
FMO01744.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:52 Download gff for
FMO01744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7780-RA | 37..1131 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:04 Download gff for
FMO01744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNaseII-RA | 39..1133 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:28 Download gff for
FMO01744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNaseII-RA | 39..1133 | 9..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:28 Download gff for
FMO01744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18019413..18019516 | 9..112 | 100 | -> | Plus |
3R | 18020076..18021066 | 113..1085 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:04 Download gff for
FMO01744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13845135..13845238 | 9..112 | 100 | -> | Plus |
arm_3R | 13845798..13846788 | 113..1085 | 97 | | Plus |